Gene Dde_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2183 
Symbol 
ID3757193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2223620 
End bp2224504 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content61% 
IMG OID637783073 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_388675 
Protein GI78357226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGG CACCCAAGGC AGTGGTTCTG GGCGGGCGCA CCGGCCTGCT GGGACAGGCG 
CTGGTGGCGG ACCTGACCCG TGCTGGCTGG CAGGTTGAAG CACACGGCAG AGAAGATGCC 
GATGTGCATG ATTCTGCCGC GCTGGAAAAA TACATCTGCT CCCATGCTCC CGACGTGCTT 
TTCAATGCGG TGGCGTACAC GCAGGTGGAC AAGGCGGAAG AAGAGCAGGA TGCCGCCATG 
CGCCTGAACA AAAGTCTGCC CGCACTGCTG GGCAGACTGG CCTGCACCGG CAACATGCAT 
CTTGTCCACT ACAGCACCGA CTTCGTCTTT AACGGACGCA AGGAAACGCC GTATACAGAA 
GATGACGAAA CCGCCCCGCA GAGCATCTAC GGCCTGTCCA AGCTGGCCGG AGAACAGGTA 
CTGCTGCAGA TGAACCTGCC CCGCCTGACG ATTATACGCA GCTCATGGCT TTTCGGTCCG 
GGCAGGGGCA ACTTTGTGCA GACCATACTG GGGCTGTGCG AGACGCGGCA GGAAATCACC 
GTGGTGCATG ATCAGGTTGG CTCGCCCACC TACACACCGG ATCTTGCCGC CGGTTCACGC 
CTGCTGGTTG AAAAAGGGGG CACAGGTCTC TTTCACCTGA GCAACGGCGG TCAGGCCACA 
TGGTGCGAGC TGGCGGCTGA GGCGGTCTCG CTGGCGCAGA AGCCCTGTCA GGTCCGGCCT 
ATCCCTTCGG CGGCTTATCC GCAGCGGGCC ACCCGCCCTG CATATTCCGT TCTCGACTGC 
TCCCGGTTCA CCGGCATTAC GGGAATCAAA CCGCGCCCCT GGATTCAGGC TCTGCGCGAG 
TATATCTTTC AGCACGTCGG CGTGGCCGGA CAGGAAGCGG GATAA
 
Protein sequence
MTVAPKAVVL GGRTGLLGQA LVADLTRAGW QVEAHGREDA DVHDSAALEK YICSHAPDVL 
FNAVAYTQVD KAEEEQDAAM RLNKSLPALL GRLACTGNMH LVHYSTDFVF NGRKETPYTE 
DDETAPQSIY GLSKLAGEQV LLQMNLPRLT IIRSSWLFGP GRGNFVQTIL GLCETRQEIT 
VVHDQVGSPT YTPDLAAGSR LLVEKGGTGL FHLSNGGQAT WCELAAEAVS LAQKPCQVRP 
IPSAAYPQRA TRPAYSVLDC SRFTGITGIK PRPWIQALRE YIFQHVGVAG QEAG