Gene Dde_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2178 
Symbol 
ID3757188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2218134 
End bp2219081 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content60% 
IMG OID637783068 
Productputative lipoprotein 
Protein accessionYP_388670 
Protein GI78357221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000288689 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAACAT TGTTTTTGTT TTTCGGAAGG CTGATGCGTC ATGCTCTGCC GCTTGTGCTT 
GCCGGCGCTT TTTGCCTTGG CACCGCAGCC GGTGTGCAGG CCCGGCAGGT GGATGTGCTT 
TGGAGTGCCG ATGCCGGAGT GCGGGACGCG GCAGCGGAAG AAAACATGCC CGCCAGTGCT 
TCTGCCGCCC GCGAAAAGGC TTTTGAGCAG GCTGTCTGGC TGGAGGCGCT CTCCATGGCG 
GACGACGGAT TGAGTGATGC CCGCAGAGAA CTGCTGCGCG AGTTTATTGT GCCCCGGGCT 
ATGGAGTATG TTCAGAGCTA CTCCGAGCTG GGCAGTGCTT CTTCTGATTC CGGTACAACG 
CTGAGTGTTG ATGTGCTGGT AAACCGCAGA GCGCTGAAAG ACACATTGCG GGGGCTGGGA 
TGTATGCGCG GCTCGGCGGA GCCTGTGGAG TACATGCTGA CCATCGGCGG TGCTTCTGAT 
GTATGGGATG AGCTGGGACG TCTGCAGGCT TTGTACAACA CAAGGGTGAC CCAGAACGCT 
TCTGTGGCGG TTTTTCTGGA ACACAGAGGG GACATGTGGA CCGGCAGACT GGATGCCGGC 
GGGCACAGCA GGGCGGCATC CGGAACCACG CTGGCAGATG CGTGGCATGG CATATGGGCG 
CAGTATTTTT CTTCGCTTGC CGCAGCCCAG GGCCCGCATG ATGCGCTGGT GCTGCAGGTC 
AGCGGCTGGT TCACCCCCGA CGGGGTGGAG TCGTTTGATA AAGAACTCAG TTCATGGGAC 
CGCGATTTTG ACGAAGCCGG TCTTGCACAG GTGAGTATGG AGACTGCCGG TATTTCAGCC 
CGCTGGGTGC TCCGCGGGGC TTCCAGAGGG GCTCTCGAAC GGCGTCTGGA GGCTGCGCTC 
GAAGGCAAAG GGCTCAGCTG GGTGCTGGAG CCTGACGGTT CACTATAA
 
Protein sequence
MRTLFLFFGR LMRHALPLVL AGAFCLGTAA GVQARQVDVL WSADAGVRDA AAEENMPASA 
SAAREKAFEQ AVWLEALSMA DDGLSDARRE LLREFIVPRA MEYVQSYSEL GSASSDSGTT 
LSVDVLVNRR ALKDTLRGLG CMRGSAEPVE YMLTIGGASD VWDELGRLQA LYNTRVTQNA 
SVAVFLEHRG DMWTGRLDAG GHSRAASGTT LADAWHGIWA QYFSSLAAAQ GPHDALVLQV 
SGWFTPDGVE SFDKELSSWD RDFDEAGLAQ VSMETAGISA RWVLRGASRG ALERRLEAAL 
EGKGLSWVLE PDGSL