| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2176 |
|---|
| Symbol | |
|---|
| ID | 3757186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2216061 |
|---|
| End bp | 2217695 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637783066 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_388668 |
|---|
| Protein GI | 78357219 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0373967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGA TAGTAATTGT GGGGGAAGGC GCCGCAGCGG CCAAGCTGGC GGCCCGGACA
AGACGGATGA CGGAGAACGC CGAGGTGAAT CTGGTGCTGT CTTCCGCCGG CGACGCCGGC
AAGGGGGTTT TCGGCAGCTA TGCGAAAAAG AACCGCATTT CGCTTGAACA GATGAAAACC
CGTGATGTGG GCGTGCTGGA AACGGATGAG CTGGATTTTG ATTTTGAAAA GCGTGAAATC
CACGTGCGCT CGGCCAGAGG CTGGCTGCCC ATGCGTTTTG ACCAGCTGGT GCTGGAAATA
AACACCGTTC CCCGTGTACC CAGAGCGTTG CGCCGCTGTG ACAATGTTGT TCCCTGGCCG
GTGGGAGATG TGGCGGCGCT TGATACCATT CTGGCAGAAA TCCGCCCCTC TGTTGCTGTA
GTGGTGGGAA GCAGCCGTCA GGCTGTGGAA CTTGTCCGGC TTCTCGCCTC TTCGGACGTT
CCCGTGCGCT GGTTGCGCAC CGCCCCTGCG CAGTCACCGG TGCTTGATGC CGATATGTGG
TTCCATGCCG ATTCGCTGAT AACTGCCTGT GCCGGCGGAG TACAGATTCT CGACTGGAGC
AGTTTCCGCC TTGACCAGCT GGCCACGGTG ACGGACGCGG ACGGCCTGCT GGTTTCACTG
GAGTCGCCGG AAGCACAAAG CGTGAGCGGC GACATGTTTT TCTGGGCGGA CCCGCAGCGG
GCCGTGCATC CGCTGCTGGC CAACGAAGGC ATCGAGCTTG CCGAAAACGG CCTGCTGGCT
GTGGATGACA ATTTCATGAC CGGTATACCG GATGTATACG CCATCGGCAG TGCTGTTTCC
GTAAAGCACT GCGGGGCAGC GCAGCTGCCT GTGGTGGCCG GTGAAGAATC TGTTTTCTCC
ATGGCCCGCC ATGTGGCTGA TGTTCTTTCC GGTGAACAGC CTTTCTCTGC CGGGGCCATG
ATCGCTCCGG TGACGCAGGC TTTTCCCGGC GGCAGGCTGT TTAAAGCCGG TACCGGACTG
GCCGAGGCTC TGGCTGCCGG CATCGAAGCC GAATTTGCCA TGCTGAAAAC CGGCGGCGGG
GCCGCAGGGC AGGCACCCTG TGCCGTAAAG CTGGTGGTGG ATAAATCCAC CCGCCGCGTT
CTGGGGGTTC AGGCTGTATC GGGTGACCCC TGCGGGTTGT CCGACGGATT CGCTTCTGCC
GGGGCGCTGG CACTGTCCGG CGGCATGACG GTGGAAATGC TGGCGGCACT GGACCTGCCC
GGCGAAAGCG GGCGCCTGCT GCGTTCCGCT GCCTGCATTG TTGATAACAA GCTGCGGGGC
AAAGTGTTCG GCATCAGCCC TGATGAACTG ATAGCTTCCC GCGCTGCCGG TGCGGAGTTT
TTCACCCTTG ATCTGCGGTC GCAGCCGGAG TGGAAAAAAG GACATATCGA AGACGCCTGC
AACATTCCTC TGCCCCAGCT GAAAGAGCGG CTGCAGGATG AAGTGCCCAG ATTCACCCCG
CTGGTCATCG TCGGCCGCAG CTCTGATGAT GCGTGGAGTG TGGCCTGTTA TCTGGCAGGG
CTGGGCGCAG GGCATGTCTA TGTGCTGGAC GGCGGCATGG ATATGTGGCC CTATGAAACC
GTCTCGCAGG GCTGA
|
|---|
| Protein sequence | MRRIVIVGEG AAAAKLAART RRMTENAEVN LVLSSAGDAG KGVFGSYAKK NRISLEQMKT
RDVGVLETDE LDFDFEKREI HVRSARGWLP MRFDQLVLEI NTVPRVPRAL RRCDNVVPWP
VGDVAALDTI LAEIRPSVAV VVGSSRQAVE LVRLLASSDV PVRWLRTAPA QSPVLDADMW
FHADSLITAC AGGVQILDWS SFRLDQLATV TDADGLLVSL ESPEAQSVSG DMFFWADPQR
AVHPLLANEG IELAENGLLA VDDNFMTGIP DVYAIGSAVS VKHCGAAQLP VVAGEESVFS
MARHVADVLS GEQPFSAGAM IAPVTQAFPG GRLFKAGTGL AEALAAGIEA EFAMLKTGGG
AAGQAPCAVK LVVDKSTRRV LGVQAVSGDP CGLSDGFASA GALALSGGMT VEMLAALDLP
GESGRLLRSA ACIVDNKLRG KVFGISPDEL IASRAAGAEF FTLDLRSQPE WKKGHIEDAC
NIPLPQLKER LQDEVPRFTP LVIVGRSSDD AWSVACYLAG LGAGHVYVLD GGMDMWPYET
VSQG
|
|---|
| |