| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2168 |
|---|
| Symbol | |
|---|
| ID | 3757178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2210765 |
|---|
| End bp | 2212453 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637783058 |
|---|
| Product | acetolactate synthase, large subunit |
|---|
| Protein accession | YP_388660 |
|---|
| Protein GI | 78357211 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCGA GCGGGGCCCG GATCCTGTTG GAGTGTCTTA AAAAGGAAGG CGTTGATGTC
ATTTTCGGCT ACCCCGGCGG GGCCGTGATC GACATTTACG ACGAACTTCC CCGGCATGAC
CTGCGTCATG TGCTGGTGCG CCACGAACAG GCCGCAGTAC ATGCCGCGGA CGGTTATGCC
CGTGCTTCCG GTCGAGTGGG GGTCTGTCTG GTCACTTCGG GACCCGGCGC CACCAATACC
GTGACCGGAA TCGCTACAGC GTACTGCGAC TCCATTCCTC TGGTGGTGCT AACCGGACAG
GTGCCGCGTG CGCTGATAGG CAATGACGCT TTTCAGGAAG TGGATATAGT GGGCATTACG
CGTCCCTGCA CCAAGCATAA TTATCTGGTG AAGGAACTGA GCGACTTGCC GCGTATTATC
CGCGAAGCTT TTTATCTTGC CCGTTCCGGC AGGCCGGGTC CCGTTCTTGT CGACCTGCCA
AAAGATATCA TGGTAGCCCG TGCAGAGTTT CAGATTCCTG AAGAAGTCAA GCTGCGCAGC
TACAACCCGA CATACAGACC GAATCTTAAC CAGCTGCGCA GAGCGGCGGA ACTGGTTCTT
TCTGCCAGAC GGCCGCTGCT GTTCGCCGGT GGCGGGGTTG TGGGGTCCGA TGCCAGCGAA
GAGCTTGGCT GGCTGGCCCG CACGTTGCAG ATTCCGGTAA CTTCAAGTCT GATGGGGCTT
GGTTCTTTTC CCGGTGACGA CCCGCTCTTT CTGGGCATGC TGGGTATGCA CGGCACCTTT
GCCGCCAACA AGGCGGTGAA TAGCTGTGAC GTGCTTATTG CCGCCGGTGC GCGCTTTGAC
GACAGAGTGA CAGGAAAGCT TTCGGCTTTT GCCGCCGGTG CCAAGATTAT CCACATAGAC
ATCGACCCCA CATCCATCAG AAAAAATGTG GGCGTAGAGG TGCCTGTGGT GGGCGACTGC
CGTATGGCGC TTGCTGGCAT GCGCGAGATT CTTTCGGCCC GCTTTGAAGA GAACATTCCC
GTACCCCGCT GGACTGAGTG GCTTGCCACG GTGCACGATT GGGCGCAGAG TCATCCTCTG
GGGTATGTGC CTTCTGAAGG TATTAAACCG CAGCAGGTTG TGGAAACTGT TTTCGGTATT
ACCAGAGGCG AGTGTATTGT CACCACCGAG GTGGGGCAGA ACCAGATGTG GGCCGCACAG
TTTTTCAAAT ACCGTAAACC GCGCACGCTG CTGACTTCCG GCGGACTAGG CACCATGGGA
TACGGTTTTC CGGCGGCTAT AGGTGCGCAG ATGGCGTTTC CGGGGCATCT GGTGATTGAT
TTTGCGGGCG ACGGTTCCAT TCAGATGAAT ATTCAGGAAC TGGCCACAGC GGTTTGTAAC
AAGCTGCCGG TTAAAATAAT TATTCTGAAC AACGGCTATC TGGGTATGGT GCGCCAGTGG
CAGGAGTTGT TCTATCAGCG TAATTACTGT TCAACCTGCA TGGAGGCCCA GCCTGATTTT
GTGAAACTGG CTGAAGCCTA CGGAGCGGAA GGGTACCGCA TCACAGCACA GGCTGATCTT
GAGCCGGTGT TGCGGCAGGC CCTGCAAAGC CCGGCTCCGG CTATTGTTGA TGTGCGCGTG
GAGCGCGAGG AAAATGTCTA TCCCATGGTT CCGGCCGGTG CGGCGCTGGA CGAGATGCTG
CTTGTGTAG
|
|---|
| Protein sequence | MESSGARILL ECLKKEGVDV IFGYPGGAVI DIYDELPRHD LRHVLVRHEQ AAVHAADGYA
RASGRVGVCL VTSGPGATNT VTGIATAYCD SIPLVVLTGQ VPRALIGNDA FQEVDIVGIT
RPCTKHNYLV KELSDLPRII REAFYLARSG RPGPVLVDLP KDIMVARAEF QIPEEVKLRS
YNPTYRPNLN QLRRAAELVL SARRPLLFAG GGVVGSDASE ELGWLARTLQ IPVTSSLMGL
GSFPGDDPLF LGMLGMHGTF AANKAVNSCD VLIAAGARFD DRVTGKLSAF AAGAKIIHID
IDPTSIRKNV GVEVPVVGDC RMALAGMREI LSARFEENIP VPRWTEWLAT VHDWAQSHPL
GYVPSEGIKP QQVVETVFGI TRGECIVTTE VGQNQMWAAQ FFKYRKPRTL LTSGGLGTMG
YGFPAAIGAQ MAFPGHLVID FAGDGSIQMN IQELATAVCN KLPVKIIILN NGYLGMVRQW
QELFYQRNYC STCMEAQPDF VKLAEAYGAE GYRITAQADL EPVLRQALQS PAPAIVDVRV
EREENVYPMV PAGAALDEML LV
|
|---|
| |