Gene Dde_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2154 
Symbol 
ID3757164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2200208 
End bp2200834 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content54% 
IMG OID637783044 
Productbiopolymer transport protein (ExbB)-like 
Protein accessionYP_388646 
Protein GI78357197 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCTGC ATGATTATCT TGAACAGGTG CTGGTGTATT TTAATGCCGG AGGGCCGACT 
ATGGTTCCTA TCATGGCATT CTCGTTTGCC ATCTGGCTTA TAATATTACT CAAATCATAC
TGGTTCATTA CCGAAAACCG CTGCGAGGCC GCGCCGGCGG ACTGCCTGCG CACCACGCCG
CAGGAAAAAT GCAGATGCGC CTGCTGGCAA CGGGAAATAG CTGATGCGTA CATTCAGTCA
AAAAGCGACG CCCCCGACCT GAACCGCAAA CTGCTGCATA GTCTCTGTGT CAGGCAGCAT
GCAAAAACAA ACAGGCTTAT CGCCACGCTT TTTATTCTGG CAGCCATCAC CCCCCTGCTA
GGTCTGCTCG GCACAGTCTC CGGCATGATA TCAACATTTA ACGTCATATC CCAGTTCGGC
ACCGGCAACG CACGGGCCCT TGCCTCCGGC ATATCAGAAG CCCTTGTAAC CACGCAGAGC
GGACTGGTGG CAGCTATTCC CGGTCTGCTC ATGGCAGCCA TACTGGCCCG CAGGGCAGAC
AAAATGAAAA AACGTATGGA AATGTTCTGC ATAGGACTTC AGTACGAAAC CGACAGCCCC
ATGACCTCAA CCCACACGGC CGGTTAA
 
Protein sequence
MQLHDYLEQV LVYFNAGGPT MVPIMAFSFA IWLIILLKSY WFITENRCEA APADCLRTTP 
QEKCRCACWQ REIADAYIQS KSDAPDLNRK LLHSLCVRQH AKTNRLIATL FILAAITPLL
GLLGTVSGMI STFNVISQFG TGNARALASG ISEALVTTQS GLVAAIPGLL MAAILARRAD
KMKKRMEMFC IGLQYETDSP MTSTHTAG