Gene Dde_2137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2137 
Symbol 
ID3757146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2184683 
End bp2185636 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content59% 
IMG OID637783026 
Producthydrogenase (NiFe) small subunit (hydA) 
Protein accessionYP_388629 
Protein GI78357180 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT CTGTGGGTCT CGGCAAAGAG GGCGCAGAAG AGCGGTTGGC AAGCCGCGGC 
GTATCACGTC GTGACTTCCT TAAATTCTGT TCCACCGTGG CCGTGGCCAT GGGCATGGGG
CCGGCTTTTG CGCCGGAAGT GGCCCGCGCC CTGACATCGG GTAAACGGCC TTCGGTGGTG
TACCTGCACA ATGCCGAATG CACAGGCTGC TCGGAGTCTG TGCTGCGCGC ATTCAACCCC
TACATCGACG AACTGCTGCT GGACACCATT TCGCTGGACT ATCACGAAAC CATAATGGCA
GCTGCAGGCC ATGCCGCCGA AGAAGCGCTG CATCAGGCAG TACACGCTCC CGACGGATTC
GTCGCCATTG TGGAAGGAGC CCTGCCGGTC AAGGACAACG GCATATACGG TATGGTCGGC
GGCAGAACCA TGCTTGACAT ATGCTCCGAC ATCCTGCCCA GAGCAAAAGC CGTCATAGCC
TACGGCACCT GTGCCACGTT CGGCGGTGTG CAGGCGGCCG CCCCCAACCC CACCGGCGCA
AAAGGCATCA ACGATGCACT GGCCGAGTTG GGTGTCAATG CCGTCAATAT CTCCGGCTGC
CCGCCCAACC CCTTTAACCT TGTGGGCACC ATCGTCCACT ACCTCCACCA TGGCACCATT
CCCGAACTTG ATTCTCAAAA CCGCCCCCTC ATGTTCTTCG GCAAATCGGT GCATGAGCAA
TGCCCGCGCC TGAAGCATTT CGACGCCGGA GAATTCGCTC CGTCCTTCGA TTCAGAAGAA
GCCCGCAAAG GGTGGTGTCT GTACGAACTG GGCTGCAAGG GTCCCATGAC CATGAATAAC
TGCCCCAAAA TCAAGTTCAA CCAGACCAAC TGGCCTGTTG ATGCCGGCCA CCCCTGCATC
GGCTGCAGCG AACCTGATTT CTGGGATGCC ATGAGCCCGT TCTACGAAAT GTAG
 
Protein sequence
MKFSVGLGKE GAEERLASRG VSRRDFLKFC STVAVAMGMG PAFAPEVARA LTSGKRPSVV 
YLHNAECTGC SESVLRAFNP YIDELLLDTI SLDYHETIMA AAGHAAEEAL HQAVHAPDGF
VAIVEGALPV KDNGIYGMVG GRTMLDICSD ILPRAKAVIA YGTCATFGGV QAAAPNPTGA
KGINDALAEL GVNAVNISGC PPNPFNLVGT IVHYLHHGTI PELDSQNRPL MFFGKSVHEQ
CPRLKHFDAG EFAPSFDSEE ARKGWCLYEL GCKGPMTMNN CPKIKFNQTN WPVDAGHPCI
GCSEPDFWDA MSPFYEM