Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2128 |
Symbol | |
ID | 3757137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2176984 |
End bp | 2177589 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637783017 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_388620 |
Protein GI | 78357171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000328007 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG ACGGCCTGAT TGTCGGCCTT GGCAACCCCG GCAAGGAATA TGAAAACACC AGACATAATC TGGGGTTCAT GCTGGCGGAC GCCCTACTTG ATGAAGTAAG GCGCACCGCG CCCCATGCCG TCACATCACT CGGCACGGGC AAAAAAAAAT ACGACTTGTG GAAGTGTGCC CCGCTTACCG GCGGGTCGTC CTGGCTGGTG GCAAAGCCGC TTACGTTCAT GAACAGAAGC GGTGATGCCG TTGCTCACAT ATGCGGATTT TATCGCATAC CACCGGAAAA AATACTGGTG CTGCACGACG AGCTGGATCT GCCGCTGGGC CGCATGAAAT TTAAAACGGC AGGAGGACTT GCCGGCCACA ACGGGCTGAA GTCCATCGCC GAACGCACCG GAAGCAAAGA TTTTCACCGC CTGCGTCTGG GCATAGGCAA GCCCCAGTCC GGTCAGACCA CAGGGTATGT GCTGGGCAGG TTCGGCAAAG ACGAACAGGC ACTGGTGGAA AAAGTGCTGC AGGCAGGAGT GGAAGGCATA CGGATTTTTG CTCAGCAGGG AGCCGTGGCC GCCACCCAGT TCATCAACGC TCAAGACATC CAGTAA
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Protein sequence | MNLDGLIVGL GNPGKEYENT RHNLGFMLAD ALLDEVRRTA PHAVTSLGTG KKKYDLWKCA PLTGGSSWLV AKPLTFMNRS GDAVAHICGF YRIPPEKILV LHDELDLPLG RMKFKTAGGL AGHNGLKSIA ERTGSKDFHR LRLGIGKPQS GQTTGYVLGR FGKDEQALVE KVLQAGVEGI RIFAQQGAVA ATQFINAQDI Q
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