Gene Dde_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2125 
Symbol 
ID3757133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2174156 
End bp2175139 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content60% 
IMG OID637783013 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_388617 
Protein GI78357168 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.575476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACCG TTCCGCAACA GACCATCCGC TCGGGGTGCA AGATAAACCT GTTTCTGGAG 
ATAACGGGAG TGCGGCCTGA CGGCTACCAC GAACTGGTCA CGCTGTTCTA TCCGCTGTCA 
GAGCCTTTTG ACCTGATGGA AATCAGCCCC GCAACGCATG GAGTGACCGT GCTGAGCGAA 
CGGGCCGACC TGTGCGGCGA CAAAAACATC ATCTGCAAGG CATGGCACAC GTTCGCGGCA 
GCAGGCGGTA CTCCGCCGCC CATGCAGGTA CGCCTTGCAA AAGGGGTACC CGACGGCGCC 
GGACTGGGCG GCGGCAGTGC CAACGCGGCC GCAGTGCTCA AGCTGCTGAA CACCGCGGGA 
GGAGCTCCAC GTTTTTCTGA CACCGCTCTG GCGAAAATAG CTGCGCAGGT CGGTGCCGAT 
GTGCCCTTTT TTCTGCATAA CACGCCGTGC CTTGCAACAG GCATAGGTGA AAAACTTGTC 
CCCGCGCCCC TTGACCTTTC CGGGTGGCAC CTTGTACTAG TCTGCCCCGG AGTTCAGGTT 
TCCACTCCAT GGGCTTATAA CCGGTGGGAC ACTCTTTACC GGAGCGGGCT GCATCACCCG 
TGCGGGCAGT TGCCCGCCGC GCACGCACCG GCGGCCTGCG CACAGTTGCA GACAACAGGG 
CCGGACCGCC CGGTACGGGC CGAAACAGGC TGCGCAGGCA GGAAAAAAAA TACCTGCCGC 
AGCTTGACAA CTGAACGGCA AGCCGATAGT AAACCTGTCT CTCGTGCCCT GTGGCTCTTT 
AACAGCTTTG AAACGGTGGT TTTCTCGGCC TATTCCGAAC TGAGACAGCA CAAGAACACG 
CTTCTTGCGC ACGGCGCTTC GGCTGCTCTG ATGAGCGGCA GCGGTTCCAG TCTGTTCGGC 
CTTTTCAGGG ACAAGGCTCA GGCCGAGGCG GCAATGCTCC ACTTCTGTCA AAGAAGCATT 
GCAGTATACG TCCACCGACT ATAA
 
Protein sequence
MLTVPQQTIR SGCKINLFLE ITGVRPDGYH ELVTLFYPLS EPFDLMEISP ATHGVTVLSE 
RADLCGDKNI ICKAWHTFAA AGGTPPPMQV RLAKGVPDGA GLGGGSANAA AVLKLLNTAG 
GAPRFSDTAL AKIAAQVGAD VPFFLHNTPC LATGIGEKLV PAPLDLSGWH LVLVCPGVQV 
STPWAYNRWD TLYRSGLHHP CGQLPAAHAP AACAQLQTTG PDRPVRAETG CAGRKKNTCR 
SLTTERQADS KPVSRALWLF NSFETVVFSA YSELRQHKNT LLAHGASAAL MSGSGSSLFG 
LFRDKAQAEA AMLHFCQRSI AVYVHRL