Gene Dde_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2083 
Symbol 
ID3757091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2130032 
End bp2131138 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content60% 
IMG OID637782971 
ProducttRNA nucleotidyltransferase, putative 
Protein accessionYP_388575 
Protein GI78357126 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.954334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACCGG AACCTATGCA GACATTCCTT GTAGGCGGTG CGGTCCGCGA CATGCTGCTG 
GGCAGAACAC CCCGCGAATA CGATTATGTA TTTTCCGGGT CGCTTGAAGA GTTTCTGCTG
CGGCATAAAA CAGCCCGCAG GGCCGGTACA CAGTTTTCCA TAGCCATCTA CAACGGGCTG
GAATTCGCCC CCATGCGCGG AAAGACCATA CATGAGGATC TGGCTTCGCG CGACTTCACC
GTCAATGCCA TGGCGCTTGA CGCCGACGGC AGACTGTTTG CCCATCCTGA AGCCCTGCGG
GATCTGGCAC TGCACAGACT GTCGCCCGCT TCATCTCATG CCCTTGCGGA CGATCCGGTA
CGGCTGTTCA GAGCCGCAAG GTTCACCGCC ACCCTGCCCG GTTTTCACAT TTCCGCAGAC
CTGAAGCGCG CCATGCGTGC AGAAGCCGGT TCCGGCAAAA TAATGGATGC AGCTCCGGAA
CGTATCGGCA GCGAAATTCA CAAAGTGCTG CACAGTGCAC GGCCGGGCAA CTTTCTGCGG
ACACTCAACG AGGCTGACTG CCTGACCGCA TGGCTGCAGG AGTTCGCCCC TGCTGAAGAG
GATGCGGCCG CGCTGCACCG TACGGCAGAT ATCATGGACA GAGCGGCAGG CGTGCCCATG
GCTGTATGGA TGGCTCTGTG CCACGATTTG AACACAGGCG CAACGCAAAG TCCGTTACCC
GCCGCAGCCC CAACGCCGGT GCGGAAACAG CCGCAGCACC ATGCGGCAGC TCCGGCAGCC
CGCAGATTCG CCATGCGCAT CAAGGCCCCG AATTCCTTTG TACGCGCTGC CGAGGTGGCC
GCTTCATGCC ACAAAGAAGG CATGCATTAC CCCGCACTTA AGGCTGAAAG CCGTGTTTCG
CTGCTCATGC GGCTGCATCT CGCCGCATTA CTTGATGATT TCTTTACCTT CATCCTAGCT
GTCACCGGCA GTGACTTTCG CAGACCGGCA GCGGAAGAAC TCGATATCCT GCTGCGGGTA
AAACTGCCCC CGGACCAGCA GGGACGGGGG CCCGAATCGG GACGCCTGCT GCACCGCATG
CGCTGCGAGG CACTGCAGAG CCGTTGA
 
Protein sequence
MVPEPMQTFL VGGAVRDMLL GRTPREYDYV FSGSLEEFLL RHKTARRAGT QFSIAIYNGL 
EFAPMRGKTI HEDLASRDFT VNAMALDADG RLFAHPEALR DLALHRLSPA SSHALADDPV
RLFRAARFTA TLPGFHISAD LKRAMRAEAG SGKIMDAAPE RIGSEIHKVL HSARPGNFLR
TLNEADCLTA WLQEFAPAEE DAAALHRTAD IMDRAAGVPM AVWMALCHDL NTGATQSPLP
AAAPTPVRKQ PQHHAAAPAA RRFAMRIKAP NSFVRAAEVA ASCHKEGMHY PALKAESRVS
LLMRLHLAAL LDDFFTFILA VTGSDFRRPA AEELDILLRV KLPPDQQGRG PESGRLLHRM
RCEALQSR