| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2078 |
|---|
| Symbol | |
|---|
| ID | 3757086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2119387 |
|---|
| End bp | 2119815 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637782966 |
|---|
| Product | CBS |
|---|
| Protein accession | YP_388570 |
|---|
| Protein GI | 78357121 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000050024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATG TCGGTGACCT GATGACTACG GAGCTGTTCA CCCTGCTGGA AACAGATACC
CTCAAAACCG CCCGCTCGCT CATGCAGCTG GCCCGTATCC GGCACATCCC CATCGTGGAT
GAGCACGGAC GGTTCATAGG CCTGCTGACA CACAGGGACA TACTCGAGGC CACTATTTCC
CGCTTTGCAG AAGTGGAGAA CTCTGTACAG GACGAAATAG ACTCCGGCAT TCCCGTCAGT
GAGATCATGC GCACGGATGT CCGCAGAGTC CCCCCCGACA TGCGGCTGCG TGATGCCGCG
GAAATGCTTT TCCGACACAA ATACGGGTGC CTGCCCGTTG TGGAAAGCGG CATTCTTGTG
GGTATTGTGA CGGAAGCTGA TTTTCTCAAG CTGACCATCA GCCTTCTGGA CGCTGTAGAA
ACCGTGTAG
|
|---|
| Protein sequence | MLNVGDLMTT ELFTLLETDT LKTARSLMQL ARIRHIPIVD EHGRFIGLLT HRDILEATIS
RFAEVENSVQ DEIDSGIPVS EIMRTDVRRV PPDMRLRDAA EMLFRHKYGC LPVVESGILV
GIVTEADFLK LTISLLDAVE TV
|
|---|
| |