Gene Dde_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2068 
Symbol 
ID3757076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp2111181 
End bp2112284 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content57% 
IMG OID637782956 
ProductO-sialoglycoprotein endopeptidase 
Protein accessionYP_388560 
Protein GI78357111 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGTT TAGGTATTGA ATCAAGCTGT GACGAGACTG CTCTGGCCAT AGTGGATGAC 
GGCCGTCTGG TCGATGCTGT GATGTCCACA CAGGCGGAGC TGCATGCGCT TTTTGGCGGG 
GTTGTGCCTG AACTGGCCTC GCGCGAGCAT TACCGGCTGA TTGGGCGCAT GTTTGATTCG 
CTTATGCTCC GGTGCGGACT TGGCGTTCAG GATATTGATG TGATTTCTGT AGCCCGTGGG 
CCGGGTTTGC TGGGCAGCCT CCTCGTGGGG GTGGGGTTTG CCAAGGGGCT GGCATTGGCC 
GGAGGCCAGC GGCTGGTAGG TGTCAATCAT CTGCATGCTC ACCTGCTGGC TGCGGGGCTG 
GAGCACCGCC TTGTTTTTCC TGCTCTGGGA GTTCTTGTTT CCGGCGGGCA TACCCATCTT 
TACCGGATTG ATTCGCCTCG TAATTTCACG CTGGTGGGGC GCACTCTGGA TGATGCCGCC 
GGTGAGGCCT TTGATAAAGT GGCAAAAATG CTCAATCTGC CGTATCCCGG CGGACGTTTT 
ATTGATGTAT TGGGGCATAT GGCTGACCCT GATGACAGCA TGTTCCCGCG GCCCTACACC 
GATAATGACA ATCTCGATTT CAGCTTCAGC GGCTTGAAGA CAGCAGTTTC CACGTGGTTG 
AAAGCTCACG GTGGCACAGC GCTTGCCGCT CCGCCGGCGG AATCCGAGCT GCAGGCCATG 
CTGCAGAACA ATGTGCTGCC GTCGGGTATG CCTGCAGATA TGCCGCTTGT GTGCGCATCA 
TTTAATGCGG CTGTGGCTGA TACGTTGTAC ATTAAAGCCC GCAGGGCGTT GCAGCGTCTG 
GGAGGGCGTG GGCAAATCCG GTCTGTGGTG GTCGCGGGCG GGGTGGCTGC AAACAGCCGT 
GTGCGTACTT CAATGCAACG TCTTGCCGCC GAAGAAGGCC TGCACTTGCA TTTGCCGTCC 
CCTGCATTAT GTACTGACAA CGGGGCCATG ATTGCCTACA CGGGCTGGTT GCTGGCATCC 
GAAGGGCTTC ATCATTCGCT CGAACTGGAA ACTATGCCGA GAGGGCGTGT TATTCCGGAT 
GATTACATTT ATGATGCCCA CTGA
 
Protein sequence
MRCLGIESSC DETALAIVDD GRLVDAVMST QAELHALFGG VVPELASREH YRLIGRMFDS 
LMLRCGLGVQ DIDVISVARG PGLLGSLLVG VGFAKGLALA GGQRLVGVNH LHAHLLAAGL 
EHRLVFPALG VLVSGGHTHL YRIDSPRNFT LVGRTLDDAA GEAFDKVAKM LNLPYPGGRF 
IDVLGHMADP DDSMFPRPYT DNDNLDFSFS GLKTAVSTWL KAHGGTALAA PPAESELQAM 
LQNNVLPSGM PADMPLVCAS FNAAVADTLY IKARRALQRL GGRGQIRSVV VAGGVAANSR 
VRTSMQRLAA EEGLHLHLPS PALCTDNGAM IAYTGWLLAS EGLHHSLELE TMPRGRVIPD 
DYIYDAH