| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2054 |
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| Symbol | |
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| ID | 3757062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2098386 |
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| End bp | 2100701 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782942 |
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| Product | DNA mismatch repair protein MutS-like |
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| Protein accession | YP_388546 |
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| Protein GI | 78357097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCCA GAAGCGCGCA CGTACTGGAA TTTGATAAGG TGCTCCGGCA CCTTGCCGGA
TATGCTGTAT CCGAAGCCGG GGCACAGGCC TGCCTTTTGC TGGCGCCCGC CGCTGACTGT
GACAGCGCCA GAATGCGCTG CGCTTTTTTC CGTCAGGGAC AGCTGTGGGC GGAACGGACA
GGGTTCTCTC TTGCTCCGTT TCCTGATCTT TCAGGAGTGT TCCGTTTTCT GGAATCACCG
GCGGCTGTGC TGGATATTGA CGCCCTGTGG GCCGTGCGGC AGGTGCTTGC GCAATCACGC
GAGCTGGCCG TTGCCATAGG GAGTGGCAAT ACGGCGGAAA ACTGGCCGCT TCTGGCGCAG
ATGCTGGAAC GTTACCGCAT GCCTGAAAAG GCTCTTTCCG GACTGATGCG TTGCCTTGGC
GAAGACGGGT TGCTGCGTGA TGAAAGTTCA CCGGAGCTGC TGCTGGTCCG GGAAGAAATA
CGCCGTATTC ACCGGCTCTG CACACGCAAG GTGAAAGAGC TGGCCAATAC TTACAATCTC
AGCCATTACA TGCAGGATGA GTTCCTGACG CTTTCCTCTG ACAGATATGT GCTTCCTTTG
AAGGCAAACT TCAAAGGCCG GCTGCAGGGA ATAATTCACG AATACTCCCA GACCGGTGAA
ACCTGCTATT TCGAACCCAT GTTTCTTGTG GAGATCAACA ACGATCTTCA GAATCTGAAA
CGGCAGGAAC GCGCGGAAGA GCGCAAGATT TTTGAATATC TCACGGGTCT GCTTCGCGCA
GAGATGGAAG GCGTGAACGC GTGCTGGAAC CTGCTTGTGG AAGCGGATGT GCTGCTGGCG
CGGTGCGCTC TGGCCGGTGC GTTTGGCGGC ATCGCCATAG ATTTTGACGA CACAAGACCC
TTTTCTCTGC GCGGGGTGAA GCATCCGCTG CTGGCACTGT CTTCTGCGGA TACGCATCCG
GTGGACCTTG AATTGCTGGA AGGACAGAAC TGCCTGATCA TCAGCGGGGG TAATGCCGGC
GGCAAGACGG TAAGCCTGAA GACCATAGGT CTTGTGGCGC TGATGGCCGC TGCCGGGCTG
CCCGTGCCTG CTGCTGAAGG CAGCACCCTG CCGTGCTGGC GTGCAGTTCA TGCTTTTATC
GGCGACGAAC AGAGCCTTGA GGGCAATGTC AGTACGTTCA CGGCTCAGAT ACGCAACCTT
AGTGATATCT GGCAGGAAGT CGGTAGCGGT TCGCTTGTTA TTCTTGACGA ATTCGGTGCG
GGAACGGACC CCGCGCAGGG CGCCGCGCTG GCTCAGGCTG TGGTTGACGA GCTTATGGAA
AAGAATGTCA CCGTGTGTGT GGCTACTCAT TTTCCGGCTC TCAAAGCCTA TGCCCTGAGC
AGGGAAGGTG TCCGCGCTGC TTCGGTGCTT TTTGATCCCG GTACCAAGAG ACCTCTGTAC
CGTCTTGCCT ATGATCAGGT TGGGGCCAGT CAGGCTCTGG ATGTTGCCCG TGAACATGGC
ATGCCCGATG CTGTGCTCAG GCGTGCGCAT AACTATCTGC TGCTGGACGG AGAAGATTCA
GCTGCGCTTA TTGAACGTCT TAATGCCCTT GCAGTATCCA GAGAACAGGA ACTGGATGAT
CTTGAACGCG AAAAGCTGCG ACTGAAGAGC AAGCGGGACA AGCTTGAAGC CAGATTTGAA
AAGGAGCGGC TCCGTCTTTT TGAAAGTGTG CAGGCTCAGG CGCAGGACGT GCTGCGTGAC
TGGAAACAGG GTAAGCGCAG CCATAAGCAG GCGTTGAAAG ACCTTGCGGC GGTGCGTCAG
CGTCTTGTCA GCGAGCAGGC CGCGGCGCAG CAGGGACAGG CCGCCCCGGT GGAAGCACTT
TGCGCAGGCA TGACTGTCCG TTATATTCCC TGGGGAAAAA AGGCTGTCAT TGAAGAGGTT
GACGCACGCA AAGAGCGCCT TAAAGTTGAC TTGAACGGTG TGTCTTTGTG GGTTTCTTGC
AAGGATGTGG CCGCGTCGGT ACCGCCTGCC GCGCCGAAGA CCGTACGGCG TGAGTCGGTG
GTGGCGGAAG ATAACGTGCA GGAACCTGCC GGTCCGCCCA TGCGCGCAGA TCTGCGCGGG
ATGAGAGCCG ATGTGGCCGT GGCAGAGCTT GCGGCTGTGC TTGATAACGC ACTGCTTGCC
GGTACCCGCG AGGTGGAAGT GGTCCATGGC CGGGGTACAG GTGCGCTGCG GAAGGAAGTT
CACGCTTTTT TGCGGAGTTT TGCTGCGGTC GATGCTTTCC GCCTTGCACC CGAAGGGCGC
GGCGGCGACG GCATGACCAT TGTCGAATTG AAGTAG
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| Protein sequence | MQSRSAHVLE FDKVLRHLAG YAVSEAGAQA CLLLAPAADC DSARMRCAFF RQGQLWAERT
GFSLAPFPDL SGVFRFLESP AAVLDIDALW AVRQVLAQSR ELAVAIGSGN TAENWPLLAQ
MLERYRMPEK ALSGLMRCLG EDGLLRDESS PELLLVREEI RRIHRLCTRK VKELANTYNL
SHYMQDEFLT LSSDRYVLPL KANFKGRLQG IIHEYSQTGE TCYFEPMFLV EINNDLQNLK
RQERAEERKI FEYLTGLLRA EMEGVNACWN LLVEADVLLA RCALAGAFGG IAIDFDDTRP
FSLRGVKHPL LALSSADTHP VDLELLEGQN CLIISGGNAG GKTVSLKTIG LVALMAAAGL
PVPAAEGSTL PCWRAVHAFI GDEQSLEGNV STFTAQIRNL SDIWQEVGSG SLVILDEFGA
GTDPAQGAAL AQAVVDELME KNVTVCVATH FPALKAYALS REGVRAASVL FDPGTKRPLY
RLAYDQVGAS QALDVAREHG MPDAVLRRAH NYLLLDGEDS AALIERLNAL AVSREQELDD
LEREKLRLKS KRDKLEARFE KERLRLFESV QAQAQDVLRD WKQGKRSHKQ ALKDLAAVRQ
RLVSEQAAAQ QGQAAPVEAL CAGMTVRYIP WGKKAVIEEV DARKERLKVD LNGVSLWVSC
KDVAASVPPA APKTVRRESV VAEDNVQEPA GPPMRADLRG MRADVAVAEL AAVLDNALLA
GTREVEVVHG RGTGALRKEV HAFLRSFAAV DAFRLAPEGR GGDGMTIVEL K
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