| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2049 |
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| Symbol | |
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| ID | 3757057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2091290 |
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| End bp | 2092906 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782937 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_388541 |
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| Protein GI | 78357092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.109224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACA TAGAAATATA CGACACCACG CTGCGTGACG GCACTCAGGC CGAGGATATA
AACCTCAGCA CCGAAGATAA AATCAAGATA GCTCTCAAGC TGGATGAGCT GGGAGTCCGG
TATATTGAAG GCGGCTGGCC GGGGTCCAAC CCTGTGGACA GATCGTTTTT CAGCGATATT
GAAAACTATG CCCTGAAAAC AGCGCGCATT GCCGCTTTCG GCAGTACGCA CCATCCTAAC
TTTCAGGCAC AGGAAGACCC CAACCTGCGG GCCATTATCG AATCGGGCGT CAGTACAGCC
ACCATTTTCG GCAAAAGCTG GGATGTGCAT GTCAAGGAAG CGCTACGTGT CACAGAGCAA
CGCAATCTGG AAATCGTTCA CGATTCCGTT GCCTATCTGC GTCAAAAGCT CTCGGAAGTG
CTTTTTGACG CCGAACATTT CTTCGACGGC TTCAAGGCAA ATCCCGACTA TGCTCTTGCG
GTGCTCCGGC AGGCTTATGC AGCCGGAGCC CGCGTGCTGG TGCTGTGCGA TACAAACGGC
GGCAGCCTGC CCAGTGAAGT GGCAACCATA ACCGCCTCTG TGCGCAAAGC CCTGCCCGAT
GCCGCGCTGG GCATACACGC ACACAACGAC TGCGAGCTTG CGGTGGCTAA TTCCATCGCC
GCGGTACAAA GCGGGGCAAC CCATATTCAG GGCACAATGA ACGGAGTCGG TGAACGCTGC
GGCAACGCCA ACCTCTGCTC CATCATCCCC ACGCTGGAAC AGAAATTTGC CCGGACGTAT
CAGTGTCTGC CCGAGGGCAG GCTTCCGCAG CTGACACGTA TTTCCCACTT TGTCTCCGAA
GTGGCCAATG TGCAGCCGTT CAGCCGCCAG CCCTTTGTGG GCAGGTCGGC CTTTGCGCAC
AAGGGGGGCA TTCATGCCAG TGCCGTTAAC CGTATGGCCA GCCTGTATGA ACATATGGAC
CCCGAAGAAG TGGGCAACAG ACAGCGGGTA CTGCTTACCG AACTTGCAGG CAGGAGCAAC
ATTGTTTCCA TAGCCCGCAG ATTCGGTTTT CATCTCGACA AGGATGAACC AGTTGTCAAA
GGTCTTCTCA AGGAACTGAA AGACAACGCA AGTCTTGGGT ACGACTATGC GGCTGCAGAG
GCATCTGTGG AGCTGCTGCT TTTTAAAAAG CTGGCCCGCA GGGGTGTCCG GCAGTTTTTC
CGGCTTATCA ATTTCCGCGT CATAGAGTCA AAACAGGGAC GCGACGCCGA ACCCATGTCG
GAAGCCACAG TCATGGTAGA AGTGGAAGGA GTGGAAGAGC ACACGGCAGC TTCCGGCCGG
GGTCCTGTCA ACGCGCTGGA CAACGCCCTG CGCAAAGCGC TTTCGGGTTT TTACCCCCGC
CTCAACGAAA TGCGGCTGCT CGATTTCAAG GTGCGGGTGC TGAACGGAAG CAAACGCAGC
GACGGCGGTA CGGCCTCCGT CGTACGGGTG CTCATTGAGT CCGGTGACCA GCATAGCCGC
TGGGTAACCG TAGGGGTATC ATTCAACATC ATCGAAGCCA GCTGGCAGGC GCTGGTGGAT
TCCATTACCT ACAAACTGTA TAAAGACGAA GGTGAACAGC GGGCCAAACT GGGCTAG
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| Protein sequence | MKHIEIYDTT LRDGTQAEDI NLSTEDKIKI ALKLDELGVR YIEGGWPGSN PVDRSFFSDI
ENYALKTARI AAFGSTHHPN FQAQEDPNLR AIIESGVSTA TIFGKSWDVH VKEALRVTEQ
RNLEIVHDSV AYLRQKLSEV LFDAEHFFDG FKANPDYALA VLRQAYAAGA RVLVLCDTNG
GSLPSEVATI TASVRKALPD AALGIHAHND CELAVANSIA AVQSGATHIQ GTMNGVGERC
GNANLCSIIP TLEQKFARTY QCLPEGRLPQ LTRISHFVSE VANVQPFSRQ PFVGRSAFAH
KGGIHASAVN RMASLYEHMD PEEVGNRQRV LLTELAGRSN IVSIARRFGF HLDKDEPVVK
GLLKELKDNA SLGYDYAAAE ASVELLLFKK LARRGVRQFF RLINFRVIES KQGRDAEPMS
EATVMVEVEG VEEHTAASGR GPVNALDNAL RKALSGFYPR LNEMRLLDFK VRVLNGSKRS
DGGTASVVRV LIESGDQHSR WVTVGVSFNI IEASWQALVD SITYKLYKDE GEQRAKLG
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