Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2007 |
Symbol | |
ID | 3757015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2048540 |
End bp | 2051029 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637782895 |
Product | ATP-dependent protease, putative |
Protein accession | YP_388499 |
Protein GI | 78357050 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.303021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGAA AACAGATTCC CGTTGTCCCC GTCGAGCAGT TGCGCTGGAC TCTTGACCCG GAGTCCCTGC CTTTTGATTC CACCGAGGAG CTGGATGAGC AGCAGCATAT TATCGGTCAG CGCCGGGGGG TTGATGCTTT CCGTATGGGA ATGGGTATCG AGGCGAAAGG GTACAATATT TTTGTGACCG GTGCTGCCGG TATCGGCAAG CTGGCAATGG TCAAACGGCT GTTGAAGAAT CATACAGCGG AAGACCGTAC ACCTGATGAC TTGTGTTATG TGAATAATTT CAGCAATCCG GATGAGCCGG CGCTGCTGCG CTTTGCCGCG GGAGAAGGAC GGCGTTTTAA AGAAGCCGTG CAGCAGTTTT TGGAAGATAT CAAACGTGAA GTACCTCAGC TGTTTGAAAG TCAGGAATAT ATCAACAGCA AGAATGAAAT AATTGAGGCG CATGACAGAA AGACACGTGA TTTTTTTAAA AACCTTGAAG CACGTGTGCG TGATGCGGGA TTTGTGCTGG TCAATATGCA GATGGGGCAG GTGCAGCGCC CCGATATCGT TCCGCTGGTG GACGGAGAGC CGGTTCACCT GATGAAACTT GAGGAAATGG CGGATAAGGG ACGTTTTCCT CAGGAAGAGC TGGAAAGCCT GCAGAAAAAA TACAAAGAAC TGAAAGAAGA GATAGATGCC ATCTTTCTTG AAGTGCGGCA CCTGCAGAAA GAAGTTAAGA AGAAAAGTGA AGAAGTAGAC AAGCTTATGT TCGGCAATGC AGCCGCTGAA CTTGCCCAGC CCCTGTATGA ATCGTTTAAA GATGAAAAGG TGATCCGTCA TCTTGACGCC ATGCTGGCTG ATATGGCTGA GAATCTGGAT ACCATACGAA TGATAGGTCA GACTCCGCAG GGAATGCCGG GCATGCCTAT GATGCCTGTG TCAGCAGAGT CTATCCTTCA CCCCTATCAG GCGAATCTGA TAGTGGATAA TGCAGAGAAA AAAGGGCGTC CGGTTATTGT GGAGTCGTAC CCCACATATC GCAACCTTTT CGGGGGCATA GACCGGGTGA TGGACCGTAG CGGAGTCTGG CGTACCGATT TTACTAAAAT CGCTTCCGGT TCGTTCATCA AAGCCAACGG AGGATATCTT GTTCTCAACT TGATGGACGC GATCATGGAG CCCGGAGTCT GGCAGACCCT CAAACGGGCA CTGAAAAATG CAGAGACAGA AATCCAGACG TTTGACCCAT GGTATTTTGT TACGACTTCG GGGCTGAAGC CTGAGCCTAT AAAAATGGAA GTGAAAGTCG TGGTGCTGGC CACACCGCAA CTATACCACA TGCTCCGGAA TTACGACCCT GACATGGTAA AGGTTTTTAA AATCAGAGCT GATTTTGATT CTACCATGGA GCGCAGCAGC GAGGCGGTGA ATGAAATCGC CCGCCTTATG AAAACATTCG GGCGGGCGCA GAACCTGCTT CCGTTCGACC GTTCTGCCGT GGCCCGGCTG ATGGAGGAAG GCGTGCGCTA TGCAGGCAGG CAGGAAAAGA TTTCAACCTC GTTTCCTGTG TTGCGCGATG TCATGGAAGA ATCGAGCCAT ATTGCCAGAC TTGCGGAGTA TGCCCGGGTG GAAGCCCGGC ATGTGGATGA AGCCATCAAG GCCAGGATAG ACCGCGCGAG CCTGATGGAA GAAAAACTGC AGGAAATGAT AGACCGCGGC AGTGTGTTTA TTGATACGGA TGGCGAAGTT GTGGGGCAGG TGAACGGTTT GGCTGTGTAT TCGCTGGGTG ACTACATGTT TGGTAAGCCT TCGCGCATTA CTGCCAACAC CTCGATGGGG CGTGAAGGTA TTATCAATAT CGAGCGCGAG GCGGATCTTT CGGGTGCCAT TCACAATAAA GGCATGCTTA TTCTGGCAGG TTATCTGCGG CAGAACTTTG CGCAGGACAA GCCCCTCAGT CTGGCGGCTT CCATCGCTTT TGAGCAGTCC TACGGCGGTG TGGACGGGGA CTCCGCCTCG TCCACCGAAT TGTATGCTCT GTTTTCAAGC CTCAGTGGTG TGCCCATCCG GCAGGGAATA GCTGTGACAG GTTCGGTCAA TCAACGTGGC GAAGTGCAGC CCATTGGTGG TGTAAATGAA AAAATCGAAG GTTTTTTCGC CTGTTGTGAA AAGAAAGGTC TGACGGGAAC GCAGGGGGTG CTCATACCCA AAGCCAACCT GAAGGACCTT ATGCTGCGCG AGCATGTTGT GCGGGCCGTG GCGGAGGGGA AATTTTCCAT ATGGGCCGTT GACCATGTTG ATCATGGCAT TGAGGTTCTT ACCGGTATGC CTGCTGGTAA GCGGAGTAAG TACGGAAAGT TCCCGGCCGG CACGGTGTAT CATCTGGTAG AAAAGAAACT GACGGCGCTT GCCGAGGGGC TGCGTGCTTT TGGAGACAAG AAAAGTGAAA CACGCAGGCA GAAACGTAAA AGTTCATCCG CAGACCAGAA GGATGAATAA
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Protein sequence | MTRKQIPVVP VEQLRWTLDP ESLPFDSTEE LDEQQHIIGQ RRGVDAFRMG MGIEAKGYNI FVTGAAGIGK LAMVKRLLKN HTAEDRTPDD LCYVNNFSNP DEPALLRFAA GEGRRFKEAV QQFLEDIKRE VPQLFESQEY INSKNEIIEA HDRKTRDFFK NLEARVRDAG FVLVNMQMGQ VQRPDIVPLV DGEPVHLMKL EEMADKGRFP QEELESLQKK YKELKEEIDA IFLEVRHLQK EVKKKSEEVD KLMFGNAAAE LAQPLYESFK DEKVIRHLDA MLADMAENLD TIRMIGQTPQ GMPGMPMMPV SAESILHPYQ ANLIVDNAEK KGRPVIVESY PTYRNLFGGI DRVMDRSGVW RTDFTKIASG SFIKANGGYL VLNLMDAIME PGVWQTLKRA LKNAETEIQT FDPWYFVTTS GLKPEPIKME VKVVVLATPQ LYHMLRNYDP DMVKVFKIRA DFDSTMERSS EAVNEIARLM KTFGRAQNLL PFDRSAVARL MEEGVRYAGR QEKISTSFPV LRDVMEESSH IARLAEYARV EARHVDEAIK ARIDRASLME EKLQEMIDRG SVFIDTDGEV VGQVNGLAVY SLGDYMFGKP SRITANTSMG REGIINIERE ADLSGAIHNK GMLILAGYLR QNFAQDKPLS LAASIAFEQS YGGVDGDSAS STELYALFSS LSGVPIRQGI AVTGSVNQRG EVQPIGGVNE KIEGFFACCE KKGLTGTQGV LIPKANLKDL MLREHVVRAV AEGKFSIWAV DHVDHGIEVL TGMPAGKRSK YGKFPAGTVY HLVEKKLTAL AEGLRAFGDK KSETRRQKRK SSSADQKDE
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