Gene Dde_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2000 
Symbol 
ID3757007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2043080 
End bp2043637 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content50% 
IMG OID637782887 
Producttransport-associated protein 
Protein accessionYP_388492 
Protein GI78357043 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0471437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAC CAATGAAAAA AATCATGCTG TTTCTGGCTG TAGCTTATTG CGCCTTCATG 
CTGAACGGCT GTGCCGTTTA TAAAGCCAGC GTGGATGAAC GCCCCATCAA AACCATTTAC 
AACGATGAAG TCATCACCGC CAACATCATG GCCGCATACC TTAAAGACGA TGCCAAAAAA 
ATTCTTGATA TTTCCCCGGC ATCTTATGAA GGCCATGTGT ATCTTGTCGG AGAATATGCA 
ACCGATTACC AGAAGCAGCG GGCCATCGAA CTGGCGCGGA AGACCGATGG AGTCCGCTCT 
GTCACCTATT ACCTGCTGCC CAAAAAAGCC GGCAGCAGCT GCGGTACCAC GGACAATATT 
GAAATTCAGG CCAAAGTGGA TGCCAAGCTG ATCGCTGACG ACCGCATCTG GTCTACCAAC 
GTGGATGTGA AAGCCGTGCA ATGCAATGTG GTTCTTCTCG GCATTGTGGG CACACAGCAG 
GAAATTTCCA GATCAGTGGC GCATGCCCGC AGTGTTCCGG GCGTTCGCAG TGTCCGCTCT 
TATCTGCGTG TGAAATAA
 
Protein sequence
MEIPMKKIML FLAVAYCAFM LNGCAVYKAS VDERPIKTIY NDEVITANIM AAYLKDDAKK 
ILDISPASYE GHVYLVGEYA TDYQKQRAIE LARKTDGVRS VTYYLLPKKA GSSCGTTDNI 
EIQAKVDAKL IADDRIWSTN VDVKAVQCNV VLLGIVGTQQ EISRSVAHAR SVPGVRSVRS 
YLRVK