Gene Dde_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1987 
Symbol 
ID3756993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2030676 
End bp2031818 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content52% 
IMG OID637782873 
Productcell wall biosynthesis glycosyltransferase-like protein 
Protein accessionYP_388479 
Protein GI78357030 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCTA AATTGTCGAT AGTGATTCCG GCTTATAATA TGGAACGCTG GTTGCCGGTG 
GCGCTGGAGT CGTGTCTGTG GCAGACAGAA AGCGATATTG AAGTCATTGT CGTCAATGAC
GGTTCCGCTG ACAGGACTCT TGATGTTGCA GGCATATATG CCGAGGCGGA CAGCCGGGTA
AAGGTTTTTG ATCAGGAAAA CAGGGGCGCC GGAGTCACGC GTGAAGTCGG TCAGCAGCAT
GCACGCGGCG ACTATCTGCT GTGGCTTGAT GCCGATGACT TTCTGGACAG AGATGCCGCG
CAGAAAATGC TTGCCGTTGC CTATCGTGAC GATGTGGACA TGGTGTGCGG CAACGCGGTG
GTTTTTTCCG AAAAAACGTT TAATACCCGC AGGTATTTTT ATCTTCCGGA GGCTTCCGGC
ATTACGTTTG ACGACCCTGC ATACTGGAAG AGCAAGGTTC TCTGGCGCTG GATTTTCAGA
ACAAATTTCC TGCGCCGTAT AGGCCTTACC CATCCTGCAT TCAAGCTCGG TCAGGATGTA
TGCAGTATGT ATCAGGCTCT GACTTCTGTG AACAGATTTT CTCAGTGCGG CCATTTCATG
TACTATTTCC GTCAGGATCA CAAACGGACA TCCATGGCGT TACCCCTTGA AGTGGATCAT
CAGATAGCCC ATTTCATAGA GGTGAAACGC ATCCTGCTTG ATGCCGGTGC GGTAAAGCCG
CTTGTGAAGT ATCTTAATGA AAATCTGTTC AGAGATATAA AAAAGCTGGC TCCGCGGATG
ACAGGCGAGG ATGCTGTCTG GCGGGAGCGG TGTGTGAGTC ATTGTCTGAC CCTGTTTGAA
GGCCTTGAGC CTGCATGGTT CCGCTCGGAT TTTCTTGCTC CGCAGCTTAA GGAGCAGACG
GCCTTTCTGC CGCTGGTAGA TGCTTTTATC AGCAAGGATA TGCAGGAGAT AGAGGCTCAG
CTGGATATCT GGAAAGCTAA AGGACTGAAG CGGAAAGCAG CCGACAAGGA AAACAGCTTT
CACACACTGC GGCGGCGCAT CAAGGCTCTC TGCACGCTCC GTTCTTTGAA AACCAGATTT
CTTTTGCGCA GCCTTGAGCG GCGAGCCCGC CGCAGGCTGT CAGAGCAGGG AATACCCTGG
TAA
 
Protein sequence
MAPKLSIVIP AYNMERWLPV ALESCLWQTE SDIEVIVVND GSADRTLDVA GIYAEADSRV 
KVFDQENRGA GVTREVGQQH ARGDYLLWLD ADDFLDRDAA QKMLAVAYRD DVDMVCGNAV
VFSEKTFNTR RYFYLPEASG ITFDDPAYWK SKVLWRWIFR TNFLRRIGLT HPAFKLGQDV
CSMYQALTSV NRFSQCGHFM YYFRQDHKRT SMALPLEVDH QIAHFIEVKR ILLDAGAVKP
LVKYLNENLF RDIKKLAPRM TGEDAVWRER CVSHCLTLFE GLEPAWFRSD FLAPQLKEQT
AFLPLVDAFI SKDMQEIEAQ LDIWKAKGLK RKAADKENSF HTLRRRIKAL CTLRSLKTRF
LLRSLERRAR RRLSEQGIPW