| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1978 |
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| Symbol | |
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| ID | 3756984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2024103 |
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| End bp | 2025350 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637782864 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_388470 |
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| Protein GI | 78357021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00280212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATCATT TCACATACCG CGACAATGAA CTCTTTGTGG AAAATGTAGC TGTTCAGGAA
CTTGTGGCCA CATACGGAAC TCCTTTGTAC ATATACTCCA AAGCGACTTT TCAGCGCCAT
TTCACAGCGT TTGATTCAGC ATTCGGTGCG CTGCCCCACC TCACCTGCTA TTCGGTGAAA
GCATGCTCCA ACATGCACAT TCTGCGCTTT CTCGGCAAAA TGGGCGCAGG CATGGACATT
GTATCGGGCG GGGAGCTTTT CAGAGCGTTG CGGGCAGGTA TTCAGCCAGC CAAAATCGTT
TACAGCGGAG TAGGAAAAAC ACGCACTGAA ATTCTGCAGG CACTGGAAGC TGGCATCCTG
ATGTTCAATG TGGAATCCAT GGGAGAGCTG GAAAAAATAA GCGAAGTGGC CAACCAGACG
GGTCACACAG CCAACGTAGC TCTGCGCATC AACCCCGATG TGGACCCGCA TACCCACCCG
TACATATCCA CCGGACTGAA AGAAAACAAA TTCGGTCTGG ACATGGAACA GTCCTATGCG
GCTTATATGC GTGCCATGGA ACTGCCCGCC ATCACACCCA TGGGTATTGA TTGCCATATA
GGTTCACAGC TGACCAGTCT GTCACCATTC AGAGAAGCTG TCGAAAAGAT ACTTCTTTTC
CGGGAAAAGC TGTGCTCTGC AGGACTGTGC ATTGACTACA TAGATCTGGG CGGAGGACTG
GGAATACCGT ATGACACCGA AGAACCGCCT CATCCGCAGG AATTCGGCAA GCTGCTTACT
GATATGCTTT CGGGACTTGG CATCACATTG ATACTGGAAC CCGGAAGGGT CATTGCAGGC
AACGCGGGCA TTCTGGTCAC CAAAGTCCAG TACACCAAAA AAACCGCTAC CAAAGAATTT
GTCATTGTCG ATGCCGCCAT GAACGATCTT ATCAGACCTT CTCTGTACCA GTCACACCAT
CATATTGCCG AAGTCAGCCC CAGAGGCAGG GCAAAACACA CGGTGGATGT TGTGGGCCCC
ATCTGTGAAT CGGGCGATTT TCTGGCACGC GACAGGCTCA TGCCTGCGGT GGAACCGCGC
GAACTGCTGG CGGTGTTCTC CGCCGGAGCA TACGGGTTCA CCATGAGCTC GCAGTATAAC
TCGCGGCCTC GTGCCGCTGA AGTTCTGGTG CGGGGTGATA CTGCTCACCT CATCAGGCGC
AGAGAGACCT ATGAGGACCT CATTGCGCCT GAAGAAACAC GTTCTTAA
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| Protein sequence | MHHFTYRDNE LFVENVAVQE LVATYGTPLY IYSKATFQRH FTAFDSAFGA LPHLTCYSVK
ACSNMHILRF LGKMGAGMDI VSGGELFRAL RAGIQPAKIV YSGVGKTRTE ILQALEAGIL
MFNVESMGEL EKISEVANQT GHTANVALRI NPDVDPHTHP YISTGLKENK FGLDMEQSYA
AYMRAMELPA ITPMGIDCHI GSQLTSLSPF REAVEKILLF REKLCSAGLC IDYIDLGGGL
GIPYDTEEPP HPQEFGKLLT DMLSGLGITL ILEPGRVIAG NAGILVTKVQ YTKKTATKEF
VIVDAAMNDL IRPSLYQSHH HIAEVSPRGR AKHTVDVVGP ICESGDFLAR DRLMPAVEPR
ELLAVFSAGA YGFTMSSQYN SRPRAAEVLV RGDTAHLIRR RETYEDLIAP EETRS
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