| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1972 |
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| Symbol | |
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| ID | 3756978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2015901 |
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| End bp | 2018597 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637782858 |
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| Product | CBS |
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| Protein accession | YP_388464 |
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| Protein GI | 78357015 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.03578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTT CACCCCCTCT TATAGCCGCC CCCGTGGTTG TGACCGCCCA TGCCAATGCC
GATTTTGACG CGCTGGCTTC CATTGTCGCC GCAGGCAGAC TATACCCCGG TGCCACACTG
CTTTTCCCCG GCAGCCAGGA ACGCACGCTG AGACACTTCT TCATCAAAAG CGCCACCTAT
CTTTTCAACT TCCGGCAGGC AAAGGACATT GATGTAACCA GCGTTGAAAA GCTGGTCATA
GTCGACACCC GCCAGCACTC AAGGGTGCCT CATGTTCATG CGATACTTGA ACGTCCGGAA
GTTGAAGTAC ACCTTTATGA CCACCACCCC GACACGGACG AGGACATACA GGGAAGCCTT
GTGACGGTCC GCCAGTGGGG AGCCACAGCC ACCATCCTGA CCACCGAAAT ACAACAGGCC
GGACTCGCGC TTACTCCGGA TGAAGCTACC ATCATCGGGC TGGGTATTTT TGAGGATACC
GGCTCCTTCA CCTTTGCCTC AACCACCGAA CATGACTTTG CCGCCGCAGG CTGGCTGAAA
ACGCAGGGAA TGGACCTGAA CACCATTTCT GAACTGCTTA CCCGTGATCT GACCAGCGAA
CAGATATCCG CCCTTAATGA ACTGCTTGAA ACAGCTCACA CGCACGACAT CAACGGTGTT
CCCGTTGTGA TAGCCGAAGC CAGCATGGAT GAATACATGG GCGACTTTGC CCTGCTGGCC
CACAAGCTGA TGGATATGGA AAACATCAGC GTGCTCTTTG CTTTGGGACG CATGGAAGAC
AGGGTACAGA TAGTGGCCCG CGCACGCTCT TCAGACGTTG ATGTGGGAGC CATATGCTCC
GGTTTCGGCG GTGGCGGACA CACATACGCA GCTTCAGCAT CCGTCAAATT CAAAACACTT
TCTCAAGTAA AGGATGAACT TTTTACGCTT CTCTATTCCG CGGTCAACAA ACAGCTGACT
GTCGGCTCCA TCATGTCTGC GCCGGTCATT GCCGAACCGG AAACGGCAAC CATTGCCAAA
GCGGCGGAAA CCATGCAGCG CTTCGGCCTG AAGGCCGTGC CGGTGGTGAT GCCGGGTACC
GCACGCTGTA CGGGCTACAT AGAATACCAG ACCGCCACCC GCGCAGTCGC TCACGGGCTG
GGCGCAGCCC CCGTGACCGA CTACATGAAC CGCCATGTGC ATACTGCATC GCCCGAAGAC
GACCTGCACA CCATGATGGA AATAATAGTA GGTCAGCGTC AGCGTCTGGT GCCCGTGGTG
GACGAAAACG GCAACGCCAT CGGAGTGATC ACCCGGACGG ATCTCATCAA TACAATAATT
GAAGAGCCCG CCCGGATTCC AGAAACGCTT CAGCCCGACA GAAAGCGTGA CCGGAACATC
CGTTCGCTGA TACGTGAACG GCTGCCCCGC ATGCACTGCG GCTGGCTGGA AGCCGCAGGA
AAGCTGGGGG ATGTTTCAGG GGTCGCTGTA TACGCTGTTG GCGGCTTTAT ACGCGACCTG
CTGCTGGGCA GGCCCAATCT GGACCTTGAT CTGGTTGTTG AAGGAGACGG GATAACATTT
GCCCGCAGAC TGGCAAAACA ACTCAACGGA CGCATACGCG AGCACCAGAA GTTCAAAACC
GCAGTTGTAA TCTTTGATGA CGAAAACGGT GTAGAAAGCC GGATAGATGT GGCTACGGCC
AGACTGGAAT ATTATGAATA CCCTGCGGCC CTGCCCACTG TAGAGCTATC TTCCATCAAG
ATGGATCTCT TCCGGCGGGA TTTCACCATT AACGCTCTGG CAGTTCAGCT CAATGAAAGC
AGTTTCGGCA GACTGGTGGA CTTTTTCGGC TCGCAGCAGG ATATCAAAGA CAAGCGTATC
CGGGTACTCC ATTCGCTGAG CTTCGTGGAA GACCCCACCA GGATTCTTAG AGCCATCCGC
TTTGAAAAAC GATACAATTT TGCTATAGGC CCGCAGACTT CACGGCTCAT CAAAAACGCT
CTCGGTCTCG GACTCATGGA AAAGTTGTCC GGTTCACGCC TGTTCCACGA ACTGCGCCTT
ATCACTGAAG AGGCCTCCCC GCTTGCCTGC TTTAAAAGGA TGGAAGAGTT CGACCTGTTG
CGCAGTGTGC ACCCGGTGCT GGCACTGAGC TATGGCAAAG AACAAATTAT CGCCGACGTG
GAAAAGGTGC TCGGCTGGCA CAGGCTGCTG TATCAGGACC CTGCGGCGGA AGCATGGACT
GTGCATCTGC TTGCCTTGTG CCACAATGCC AAATATGCCG ACGTGCGCGA TCTGCTTAAA
AGACTGTATC TGCCGCGTAA GCAGAGCCGT GATTTTATGC TGCTGCGTGA AAACACCCGT
GAAGCGGCGG CCCTGCTTTC CACATGGCTG AAAAAAGACC GTTCCATGAG CGGACTTTAC
AACATCCTGC ATTCTTTGCC GCCCGAAGGC CTTCTTTACA TCATGGCAAG AACACGTGTG
GATGAAATCC GCAAATTCGT CTCGCATTAC CTCACCAAGC TGCGGGATAT CCGGACAGAC
ATCAGCGGCG AAGACCTGCA GGCCATGGGC GGGCACCCCG GCCCTTGCTT CGGCAAGGTG
CTGAACCATG TGCTGGCAGC CAAACTGGAC GGAGCAGCCC ACAGCCGTAA AGAACAGCTG
GAGCTGGCCC ACAGCATGCT GCGACGCTAT AATTACGGCC GCGACGAACA GCAATAG
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| Protein sequence | MTTSPPLIAA PVVVTAHANA DFDALASIVA AGRLYPGATL LFPGSQERTL RHFFIKSATY
LFNFRQAKDI DVTSVEKLVI VDTRQHSRVP HVHAILERPE VEVHLYDHHP DTDEDIQGSL
VTVRQWGATA TILTTEIQQA GLALTPDEAT IIGLGIFEDT GSFTFASTTE HDFAAAGWLK
TQGMDLNTIS ELLTRDLTSE QISALNELLE TAHTHDINGV PVVIAEASMD EYMGDFALLA
HKLMDMENIS VLFALGRMED RVQIVARARS SDVDVGAICS GFGGGGHTYA ASASVKFKTL
SQVKDELFTL LYSAVNKQLT VGSIMSAPVI AEPETATIAK AAETMQRFGL KAVPVVMPGT
ARCTGYIEYQ TATRAVAHGL GAAPVTDYMN RHVHTASPED DLHTMMEIIV GQRQRLVPVV
DENGNAIGVI TRTDLINTII EEPARIPETL QPDRKRDRNI RSLIRERLPR MHCGWLEAAG
KLGDVSGVAV YAVGGFIRDL LLGRPNLDLD LVVEGDGITF ARRLAKQLNG RIREHQKFKT
AVVIFDDENG VESRIDVATA RLEYYEYPAA LPTVELSSIK MDLFRRDFTI NALAVQLNES
SFGRLVDFFG SQQDIKDKRI RVLHSLSFVE DPTRILRAIR FEKRYNFAIG PQTSRLIKNA
LGLGLMEKLS GSRLFHELRL ITEEASPLAC FKRMEEFDLL RSVHPVLALS YGKEQIIADV
EKVLGWHRLL YQDPAAEAWT VHLLALCHNA KYADVRDLLK RLYLPRKQSR DFMLLRENTR
EAAALLSTWL KKDRSMSGLY NILHSLPPEG LLYIMARTRV DEIRKFVSHY LTKLRDIRTD
ISGEDLQAMG GHPGPCFGKV LNHVLAAKLD GAAHSRKEQL ELAHSMLRRY NYGRDEQQ
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