Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1959 |
Symbol | |
ID | 3756965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 2007091 |
End bp | 2007717 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637782845 |
Product | hypothetical protein |
Protein accession | YP_388451 |
Protein GI | 78357002 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.51951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGAAA TTGAACTGAA CTGCCAGAAC CTTCCCTGCC CCCAGCCTGT GCTGAAGTGC AAGGATTGTA TTGATACCCG GTCTCCCGCA CAGATGGCTG TCATTGTGGA TAACGCTGCG GCAAAAGAGA ATGTAACGCG TTTTCTGGGT ACCCGCGGGT ATGCGGTGAC GGCAACGGAA ACTCCGCAGG GGGCATGGAA ACTTCAAGCT GTACTTGAAT CTTCTGTCGG GGCTCAGAGC GGTTGCGAAC AGTGCGAAGT GCTTTCGTCT GAAGAACTGC GTGCTCTGGA TGAAAAAACG GTTGTTCTGA TTACCACTGA AGTGCTGGGG AGCGGAGATG ATACACTCGG AACAAGGCTG ATGAAAAACT TTCTGGCAAC GCTGCCCGAG CTGGGCAGTA CCTTGTGGCG GGTTGTTTTG CTTAACGGCG GCGTAAAGCT CGCTTCGGAC GGCCACGAAG CACTTCCTGA ACTGCAGAAG CTTGAGTCTG CCGGGGTGGA CATTCTGGTC TGCGGAACGT GCCTTGACTT TTTCGGTCTG CTGGAACGCA AAGCGGCCGG ACAGACGACC AACATGCTGG ATGTTGTGAC AAGTCTGCAA TTGGCTACAA AAGTTATCCG TCCCTGA
|
Protein sequence | MPEIELNCQN LPCPQPVLKC KDCIDTRSPA QMAVIVDNAA AKENVTRFLG TRGYAVTATE TPQGAWKLQA VLESSVGAQS GCEQCEVLSS EELRALDEKT VVLITTEVLG SGDDTLGTRL MKNFLATLPE LGSTLWRVVL LNGGVKLASD GHEALPELQK LESAGVDILV CGTCLDFFGL LERKAAGQTT NMLDVVTSLQ LATKVIRP
|
| |