Gene Dde_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1953 
Symbol 
ID3756959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2002165 
End bp2002722 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content53% 
IMG OID637782839 
Productelongation factor P 
Protein accessionYP_388445 
Protein GI78356996 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000145103 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTCCA CTACCGATTT CAGACGCGGC CTGCGTATCG AAATTGACGG CACCCCTTTT 
GAAATTGTCG ACTTCCAGCA CTTCAAGCCC GGCAAAGGCG GGGCCATTGT GCGTACCAAA
ATGCGCAACC TGCTCACCGG CCGCATTATG GACAACAACT TCCGTTCCGG CGAAAAAGTA
GGCCGTCCCG ACATGGAAAA CCGCGACATG CAGTTTCTGT ATCGTGAAGA CGCCAATCTT
GTTTTCATGG ACATGACGAC CTATGAGCAG ATTTACATGC CGGAAGAAAC CACGGAAGGC
AAAGCAGGAT TCCTTAAGGA AGGGCAAACC ATCCGCGTAC TGCTGTTCAA CGGCACGCCG
CTGGCCATCG AACTGCCTGC AGCGCTGGTG CTCGAAGTGA CCGAAACAGA ACCCGGTGCA
AAAGGCGACA CCGTCTCCAA CGTGACCAAG CCGGCAACCC TTGAAACCGG TATCGTCATT
CAGGTTCCTA TTTTTGTGAA CCAGGGAGAC AAGGTTAAAG TAAACACGGA CACCCGTGAA
TACATGGGAC GGGAATAG
 
Protein sequence
MYSTTDFRRG LRIEIDGTPF EIVDFQHFKP GKGGAIVRTK MRNLLTGRIM DNNFRSGEKV 
GRPDMENRDM QFLYREDANL VFMDMTTYEQ IYMPEETTEG KAGFLKEGQT IRVLLFNGTP
LAIELPAALV LEVTETEPGA KGDTVSNVTK PATLETGIVI QVPIFVNQGD KVKVNTDTRE
YMGRE