| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1949 |
|---|
| Symbol | |
|---|
| ID | 3756955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1999717 |
|---|
| End bp | 2000796 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637782835 |
|---|
| Product | permease, putative |
|---|
| Protein accession | YP_388441 |
|---|
| Protein GI | 78356992 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000528059 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCC TTTCCCGCTA TCTGCTCAGA ACAAACCTGT TTCTGACCAT GCTGACACTG
ACCATCGGCA CCGGTATCTA TCTGCTTTCC GACCTGTTTG ACAGGCTGGA TGATTTTCTG
GGAGCCGGGC TGGGCCTCAA AGTTATCCTG ACGTACTTTG CGGTCAAAAT ACCGCTGATC
ATTTCTCAGA TCCTGCCCGC CGTATTTCTG CTGTCGGCAG TCATCCAGCT GTGTGTCATG
GCGCGGGACA GAGAGCTGGT AGCCCTTCAG GCGGGCGGCA TCTCCTTCCT GCGCCTCGCG
CGTTTCTTTA TAATTTATGC ACTCATCTGG TCAGCTGTTC AGCTGGGTTT TTCGCAGGTG
CTGGGCATAT ACGGAGAACG GGAAGCCAGC AGAATCTGGA AGGAACAAGT CCGTAACCGG
GAAATAGACG AAGTGCAGCT TACCAACCTG TGGTTCACCG AGCATGGTCG CATCATCCAT
CTGGAAACGC TGCACCCTGC GGCCCAGAAA GGCTCCGGCA TAACGGTCTA CGAGCTCACG
CCCGACGAGC TTTCCGTGCA GCGGGTGATC CGGGGCAAAA GTTTTCGTGC CGACTCTTCC
GGCTGGACTC TTGACGGCTG CGACATTCTT ATTCCGGGCA GTTACGAGGT GGCCACCTCC
GAATCGATTG TCCTGCCCAT TGAACAGGAC GTCAAAGCGT TTTCCATTGT CGATCCGAGA
GGCGACCCTT CGCGTCTGCC CCTGTGGCAG CTGCAGGACG CCATAGCCCG CCTTACCGAA
AGCGGCTCCA ATGTTGAAGC CTTACGCACG GCATGGCACA TGAAGCTCTC CTATGCATTT
TCGCTGGTAA CCATGGCTCT GCTGGCACTG GCACTTATAA CATGGCGAGA CAGCATATAC
ATAAACGTGG GAACATCACT GCTGCTGGTA TTTGTCTTTT ACACGCTATT CACCGTAGGG
GGTTCTCTGG GCGAGAACGG CATAGTCCCC CCATTGTTTG CCGCATGGAC AGCCAACGCG
TTTTTCAGCC TTTCAGCCAT CGCCAGACTG ATTTATGTAT CCAGAGCCCG CGCCGCCTGA
|
|---|
| Protein sequence | MSILSRYLLR TNLFLTMLTL TIGTGIYLLS DLFDRLDDFL GAGLGLKVIL TYFAVKIPLI
ISQILPAVFL LSAVIQLCVM ARDRELVALQ AGGISFLRLA RFFIIYALIW SAVQLGFSQV
LGIYGEREAS RIWKEQVRNR EIDEVQLTNL WFTEHGRIIH LETLHPAAQK GSGITVYELT
PDELSVQRVI RGKSFRADSS GWTLDGCDIL IPGSYEVATS ESIVLPIEQD VKAFSIVDPR
GDPSRLPLWQ LQDAIARLTE SGSNVEALRT AWHMKLSYAF SLVTMALLAL ALITWRDSIY
INVGTSLLLV FVFYTLFTVG GSLGENGIVP PLFAAWTANA FFSLSAIARL IYVSRARAA
|
|---|
| |