| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1948 |
|---|
| Symbol | |
|---|
| ID | 3756954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1998527 |
|---|
| End bp | 1999720 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637782834 |
|---|
| Product | permease, putative |
|---|
| Protein accession | YP_388440 |
|---|
| Protein GI | 78356991 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00215493 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGA CTCTGTTCCG TTTTCATATA ACGCTGTTGC AGAAGCAGCT GTTCAAAGAG
CTTGTCTCTC TTTTCGGCCT CTGCCTCGGC TCACTTCTTT CTCTGATTCT TATCGGCAGA
ATGCTGCAGT TGCGCGAGCT GTTTCTGGGT CTCGACCTGA ATGCGCTCGA TATGGCGACA
CTTTTCGTAT ACCTGAGTCC GCTTTTTCTC ACCCTGATAA TACCCATTGC CTGCATGCTC
AGCGTGTTTC TGGCTTTTCT GCGTATGAGT ACCGACAGAG AGCTGGTGGC GCTCAAGGCC
GGCGGGCTGA GCCTGTTTCA ACTGCTTCCG GCGCCGCTGC TTTTCTGTCT GCTGTGCGGC
CTGCTCAACC TGTATATTTC TCTTAGCGGT GTCGCCTGGG GAATGGGCAA TTTTCGCCAC
ACCATAATGG AAATAGCCAA CACCCGTGCG AAGATAGTTC TCCAGCCGGG CGTGTTCAAT
CAGACTGTTC CCGGGCTTAC GGTGTTTGCC CGCACGGTGG ACAACAGTTC GGGCAAACTT
GGGCATGTAC TGGTTGAAGA TAACAGCAGA GACGAAACAA GTATTCTCAT TCTGGCACCC
CGGGGACAGC TGCGCTCGGA TGAACAGCGG GGCGAACTGG TTTTTATACT CCACAACGGA
AAAATATACC GCCAGCAGGA AGACAGCGTA AGCGTGCTCG ACTTTAATGA CTACACTGTC
CGCCTTGACC TCGGCCAGAT TTTCAAAGGG GTGAGTCTGG GAAAAGTAAA ACCCAAAGAA
CTTTCATGGA GCGAGCTGCG CAGCATCGGT CCGGACCACC CGGAAGCCCG AAGGGACAGT
AATTTTCTGC GCAAAGTTCA TGTAGAGCTT CAAAAACGCT GGGTGCTGCC CATGGCATGC
CTTGTTCTGG GGCTTTTCGC CATGCCGCTT GCATGCGCTT TTCAGGGACT GGACAAACAA
TTCGGCATTC TGCTGGCTCT GGGGATGTTT CTGATTTACT ACACGATGCT TTCAGTAGGC
CTTTCCACCG GAGAATCCGG CACCGTTCCT CCTGCCGTGG GGTTATGGAT GCCTAACCTC
ATATTCCTTG CCGTAGGGCT TTTCTGGCTG GACAGGGCAG AAAGAGAACG CTCGCTCAAT
ATCATGAGTT TTATTCTGCA TGCGAACCTG TTCCGCAAAA AGAGGGCACA GTGA
|
|---|
| Protein sequence | MEGTLFRFHI TLLQKQLFKE LVSLFGLCLG SLLSLILIGR MLQLRELFLG LDLNALDMAT
LFVYLSPLFL TLIIPIACML SVFLAFLRMS TDRELVALKA GGLSLFQLLP APLLFCLLCG
LLNLYISLSG VAWGMGNFRH TIMEIANTRA KIVLQPGVFN QTVPGLTVFA RTVDNSSGKL
GHVLVEDNSR DETSILILAP RGQLRSDEQR GELVFILHNG KIYRQQEDSV SVLDFNDYTV
RLDLGQIFKG VSLGKVKPKE LSWSELRSIG PDHPEARRDS NFLRKVHVEL QKRWVLPMAC
LVLGLFAMPL ACAFQGLDKQ FGILLALGMF LIYYTMLSVG LSTGESGTVP PAVGLWMPNL
IFLAVGLFWL DRAERERSLN IMSFILHANL FRKKRAQ
|
|---|
| |