| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1946 |
|---|
| Symbol | |
|---|
| ID | 3756952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1997365 |
|---|
| End bp | 1998162 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637782832 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_388438 |
|---|
| Protein GI | 78356989 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0029387 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC TGCTTACGGC TGCCGTGCTG GGACTTGTGG AGGGTCTGAC AGAATTTTTG
CCAGTATCTT CAACGGGGCA CCTGATCATT ACGGGCTACC TGCTCGAATA TACCGGCCCC
AAGGCGGAAT CGTTTCAGGT CGCCATACAG CTTGGAGCCA TTCTGGCCGT CGTGTTTCTT
TATAAAGAAC GCTTTGCCGC CCTGTTTCGC TTCGGTACCG GTCACGGGCG GTTTTCCGGA
TTGCGGGGGT GGTACCTGCT TGCTCTTACC TCTGCCCCGG CCAGCGTGCT GGGCCTTTTG
ACACACAGCT TTATCAAGGA GCATCTTTTC GGGCCGGTCA CTGTGGCATG GGCGCTGGCT
GCAGGGGCGC TGTACATTCT GGCTGTTGAG CACAAAGGTG AAGGAACCCG TTACGAAACG
CTGGATGATG TTTCTCCCGC ACTGGCTTTG GGAATAGGCA TGTTCCAGTG CCTTGCGTTG
TGGCCGGGGT TCTCACGGTC GGCGGCAACC ATCATGGGGG CTCTGCTGCT GGGCAGCCGG
CGCCGGCTTG CTGCGGAGTA TTCGTTTGTC GCCGCTGTAC CCATCATGTT TGCCGCCACA
GGGTACGATA TGTACAAATC TTATTCTCTC TTCTCTCCTG CGGACATTCC TTTCTGGGCT
GTGGGGCTGC TGGTGTCTTT TGCTTCGGCA TGGGCGGCGG TCAAAGGCTT TATCCATCTT
GTGGGGCGGG TCACATTCCG TCCTTTTGCC TGGTACCGGC TTGCGCTTGC CCCCGTCGTG
CTTCTTTTTT GGAGCTGA
|
|---|
| Protein sequence | MTDLLTAAVL GLVEGLTEFL PVSSTGHLII TGYLLEYTGP KAESFQVAIQ LGAILAVVFL
YKERFAALFR FGTGHGRFSG LRGWYLLALT SAPASVLGLL THSFIKEHLF GPVTVAWALA
AGALYILAVE HKGEGTRYET LDDVSPALAL GIGMFQCLAL WPGFSRSAAT IMGALLLGSR
RRLAAEYSFV AAVPIMFAAT GYDMYKSYSL FSPADIPFWA VGLLVSFASA WAAVKGFIHL
VGRVTFRPFA WYRLALAPVV LLFWS
|
|---|
| |