| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1945 |
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| Symbol | |
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| ID | 3756949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1994972 |
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| End bp | 1997002 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637782829 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_388437 |
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| Protein GI | 78356988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATCA AAGCCCCTTT CACGGGGCTT TTTTCTTTTT GTCCGTTCTC AGCTGCCCTC
CGCTTCCGCG CCGTCTTGTC TTTACGTTAT TTACCCTCAG TTGTTTTATG CCGGAATATC
ATTTCCGCCC TGCTGTCAGC TATCTATATT GATGGCATGA TTGCTCCTGA TTTCAAGCCG
TTTTTTTTAA AGAAAAGCAG AAATTCCTCA GGCGTGTTCA CAGCCTTTCT CACGCTGTTC
ATTCCTGCGG TGTTTCTGTC TGCTCTGGCC ATCGCGCTTT TTCTCTATGC GGATATGCAG
CACCGGATCG ATCTGGAAAA AAGGCAGGAA TCCGCCAGCG TGAGCAGCGC ATATGACGGT
ATTTCCATGG AACTGAATAT CGTTTTTCAG AGTATACTGA ATGCGCTTAA CAGAGGGTCT
TTGAAGGAAT ACGCCGCGGT TCCCTCCTCT GAAAATTTTG CACGTCTGGT CTCTGACATG
TACTCCTTTG CACTGGATAA CAATCAGTTT GATCAGATTC GTATGCTTGA TCCCGCAGGC
ATGGAACTGC TGCGCATCAA CCGGAGTGAC AGCGGGCCGG TTCTGGTTCC CGAAGAGAAT
CTGGCTGATA AATCAAGGCG CTATTATTAT AAAGATATTA TGGAGCTGGC TCCTGACAAT
ATCTACATAT CACGTCTGGA CCTTAATATT GAAAACGGTG TGGTTGAAGT CCCCTACAAG
CCTATCATCC GTATCGGGAC AAAGCTGCTG GACAGAAGCG GCAAACTTCT GGGTATCATG
GTTTTTAATT ACCTTGCGGA TAATATGCTG AACGGTGCCT GGATGCTGCG CAGCTCCGAT
CAGGGTGTGC TGATGCTGCT GGATCATGAG GGATACTGGT TGCAGTCGGA TACCCCTTCG
CAGCACTGGG GGTTCATGTT CGGTGATACG CTGGGTATTA ATTTTGCCCA GCGGCATCCG
GGGGTCTGGC AGCAGATGCT GCAGACGGGC TCCGGGCAGA TCGCCACCTC TGACGGGGTG
TTTACGTATG CAGCCGTCGC GGCCTCTCCG GCGGGCCACA CCATCTATTC CTACAAGCAG
ATACATGTGC CGGATAAGTA TCTGCGCGAC TGGTTCATTG TTTCCTACAT GCCTTTTCCG
TCCATGACGG AGTTTCTGTG GGCAGAAGGA CTGCCCTACT CCATGGCATT TTTTCTTGTA
TGTCTGCTGA GCATGGTCGG GACATTCATG CGGGCCGGTT TTCTGCAGGA GCGCAAAGAG
GCGGTGCTTG CTTTGCGGAA AAGCGAAGAA CGTTTCAGAG GGATTGTCGA AACTTCGCAC
GACTGGATAT GGGAGATGGA TCTGAGCGGG TGGATTACCT ATTCAAGCCC GCGCATACGG
GAAATACTGG GATACAGTGT GGAAGAGGCA TACGGAAAGC GTATTTTTGA CCTTATGTCC
TACAATGATG CCCGCACCGC ATGGGGGCAT TTTATGAAAG CAGTGGAAAA CGCCGCCGCC
GTTGAACACC ACGAAAACGC TTTTCAGCAT AAGGCCGGCC TGCGGGTGGT GCTGGAATCG
AACATGGTGC CCATGGAAGG TGACTCCGGA GAACTGCTGG GCTTCAGGGG CATTGCTCGG
GACGTTACGG AAAAGAAGAT TGTTCTTTCC CAGCTGGAAA CGGCGCGTAA AGAGGCTGAA
AATGCCAGCC GGGCCAAAGG AGAGTTTCTG GCCCGTATGA GTCATGAAAT CCGCACCCCC
ATGAATGCCG TCATCGGCAT GTGCCATCTG GCGCTGAAAA CAGCACTTAC GCCTAAGCAA
TTTGATTATC TTACAAAAAT ACAGTCTTCC GCCAATTCGT TGCTCGGGGT CATTAATGAT
GTCCTTGATT TTTCAAAAAT CGAGGCCGGC AAACTGGATA TGGAGCGCGT GCGGTTTAAC
CTGGAAACCA CTTTGACAAA TGTGGCCAGT GTCAATTCCA TTGCGGCATC AGTGTTACCG
GACAATGATA TTGTCACCCC TGTCTGGGAC AATAGAAATG TCATCCCATG A
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| Protein sequence | MFIKAPFTGL FSFCPFSAAL RFRAVLSLRY LPSVVLCRNI ISALLSAIYI DGMIAPDFKP
FFLKKSRNSS GVFTAFLTLF IPAVFLSALA IALFLYADMQ HRIDLEKRQE SASVSSAYDG
ISMELNIVFQ SILNALNRGS LKEYAAVPSS ENFARLVSDM YSFALDNNQF DQIRMLDPAG
MELLRINRSD SGPVLVPEEN LADKSRRYYY KDIMELAPDN IYISRLDLNI ENGVVEVPYK
PIIRIGTKLL DRSGKLLGIM VFNYLADNML NGAWMLRSSD QGVLMLLDHE GYWLQSDTPS
QHWGFMFGDT LGINFAQRHP GVWQQMLQTG SGQIATSDGV FTYAAVAASP AGHTIYSYKQ
IHVPDKYLRD WFIVSYMPFP SMTEFLWAEG LPYSMAFFLV CLLSMVGTFM RAGFLQERKE
AVLALRKSEE RFRGIVETSH DWIWEMDLSG WITYSSPRIR EILGYSVEEA YGKRIFDLMS
YNDARTAWGH FMKAVENAAA VEHHENAFQH KAGLRVVLES NMVPMEGDSG ELLGFRGIAR
DVTEKKIVLS QLETARKEAE NASRAKGEFL ARMSHEIRTP MNAVIGMCHL ALKTALTPKQ
FDYLTKIQSS ANSLLGVIND VLDFSKIEAG KLDMERVRFN LETTLTNVAS VNSIAASVLP
DNDIVTPVWD NRNVIP
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