Gene Dde_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1932 
Symbol 
ID3756935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1983988 
End bp1984611 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID637782816 
ProductLexA repressor 
Protein accessionYP_388424 
Protein GI78356975 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.424325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAG CGAAGACGGA TGAGATAACG CCGTTGCAGC GGAAAACGCT CGAAGCGATA 
TGTCGTTTTG TCGATGCCAA GGGCTTCCCT CCAACGGTGA AGGAACTGAG CGAGATCTTT
GAAATCAGCC CGGCGAGTGC CCACGACCGG ATCAATCAAC TGGTGCGCAA GCGATACCTG
AAGCGGGAGG GCGGGAAGTC GCGGGGCATT GCGGTCGCCC GCCGTCCCAG CGAGATGGCT
GCCTCTCTGG TTTCAGTACC TGTTGTGGGG ATGGTGGCGG CTGGCCGTCC CATCCTGGCC
GAGGAGAACA TCACCGGCCA AGTGCTGGTC GAGTCGGACG TCGTTCGTTC CGGACAGCAC
TTCGCACTCC GTGCGGTGGG TGACAGCATG ATCGGTGCCG GTATCAACGA TGGCGATTTG
ATCATCGTGC GGCAGCAGCC CATCGCCGAG GATGGTGACA TCGTTGTAGC GCTGCTCAAC
AACGAGGCGA CCGTCAAACG GCTGAAAATC AAAGACGAGC TCATCGAATT GGTGCCGGAG
AACCCGGAGG TAAGAAAGAT CCGGATCAGG CCGGAGGATG ACCTTCGAGT TTTAGGCAAG
GTCGTTGGAT GGAAACGGAG TTAA
 
Protein sequence
MGKAKTDEIT PLQRKTLEAI CRFVDAKGFP PTVKELSEIF EISPASAHDR INQLVRKRYL 
KREGGKSRGI AVARRPSEMA ASLVSVPVVG MVAAGRPILA EENITGQVLV ESDVVRSGQH
FALRAVGDSM IGAGINDGDL IIVRQQPIAE DGDIVVALLN NEATVKRLKI KDELIELVPE
NPEVRKIRIR PEDDLRVLGK VVGWKRS