Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1932 |
Symbol | |
ID | 3756935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1983988 |
End bp | 1984611 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637782816 |
Product | LexA repressor |
Protein accession | YP_388424 |
Protein GI | 78356975 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.424325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAAG CGAAGACGGA TGAGATAACG CCGTTGCAGC GGAAAACGCT CGAAGCGATA TGTCGTTTTG TCGATGCCAA GGGCTTCCCT CCAACGGTGA AGGAACTGAG CGAGATCTTT GAAATCAGCC CGGCGAGTGC CCACGACCGG ATCAATCAAC TGGTGCGCAA GCGATACCTG AAGCGGGAGG GCGGGAAGTC GCGGGGCATT GCGGTCGCCC GCCGTCCCAG CGAGATGGCT GCCTCTCTGG TTTCAGTACC TGTTGTGGGG ATGGTGGCGG CTGGCCGTCC CATCCTGGCC GAGGAGAACA TCACCGGCCA AGTGCTGGTC GAGTCGGACG TCGTTCGTTC CGGACAGCAC TTCGCACTCC GTGCGGTGGG TGACAGCATG ATCGGTGCCG GTATCAACGA TGGCGATTTG ATCATCGTGC GGCAGCAGCC CATCGCCGAG GATGGTGACA TCGTTGTAGC GCTGCTCAAC AACGAGGCGA CCGTCAAACG GCTGAAAATC AAAGACGAGC TCATCGAATT GGTGCCGGAG AACCCGGAGG TAAGAAAGAT CCGGATCAGG CCGGAGGATG ACCTTCGAGT TTTAGGCAAG GTCGTTGGAT GGAAACGGAG TTAA
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Protein sequence | MGKAKTDEIT PLQRKTLEAI CRFVDAKGFP PTVKELSEIF EISPASAHDR INQLVRKRYL KREGGKSRGI AVARRPSEMA ASLVSVPVVG MVAAGRPILA EENITGQVLV ESDVVRSGQH FALRAVGDSM IGAGINDGDL IIVRQQPIAE DGDIVVALLN NEATVKRLKI KDELIELVPE NPEVRKIRIR PEDDLRVLGK VVGWKRS
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