Gene Dde_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1923 
Symbol 
ID3756926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1977071 
End bp1977553 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID637782807 
Producthypothetical protein 
Protein accessionYP_388415 
Protein GI78356966 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00139334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGACC GGATCACCGT TGTCGTCGAC ACCCGCGAAC AGGAGCCCTA CAGCTTCGAT 
ACAGACAAGG TTTCGGCAGT TCGCAAAGCG CTGCCCGCCG GTGATTACTC ACTGGTCGGC
CTCGAGGAAC GGGTGGCGGT GGAGCGTAAA TCCCTGACGG ATTTCGTCTC CACCGTCATC
CGGGGGCGAA AGCGGTTCCA CCGCGAGTTG GAAAAGCTCT CTGCCTACGA ATCCGCCTGC
GTGGTTGTCG AGTGCAACTT TCGCGATCTG GTCGACGGCC GCTACCGCAG CGATGCCCAC
CCGCACGCGC TGATCGGAAC GGTCGCCTCC ATCGTCGTCG ACTTCGGTGT CCCCGTCTAC
TTCTGCTCGG ACCGGCAGGC CGCCTGCCGT TTTGTCGAGG AGTACCTGAC ACGTTTTCAC
CGGAGGATCG CGAGATGCCA AAAAGAAATG AGAGTAACCC GGCGCGACTC CGGGGAAGAA
TAG
 
Protein sequence
MMDRITVVVD TREQEPYSFD TDKVSAVRKA LPAGDYSLVG LEERVAVERK SLTDFVSTVI 
RGRKRFHREL EKLSAYESAC VVVECNFRDL VDGRYRSDAH PHALIGTVAS IVVDFGVPVY
FCSDRQAACR FVEEYLTRFH RRIARCQKEM RVTRRDSGEE