Gene Dde_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1922 
Symbol 
ID3756925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1974891 
End bp1976987 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content62% 
IMG OID637782806 
ProductATP-dependent RecD/TraA family DNA helicase 
Protein accessionYP_388414 
Protein GI78356965 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0245308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCGCCC GGGAAAATCA GCCTGTGGTC CTGCTCGGGT CGTGGGCCAC CCATCCCAAA 
TACGGCCGTC AGTTCAAGGT CGACGGGATG GAGCACGACC TCGAACTCGA TCCGGAGGGG
CTGATCCACT ATCTGGCCAA CCATCCGGAG ATCAAGGGCA TTGGTCCGGC CAAGGCCAGA
TTGATCGTCG AGAGTTTCGG CGACGCCTTT GAAGAAACCC TTCTGAATGA CCCCGAGCGC
ATCGCGCTCA AAGCTCGGCT GCCCTTGGAT GCTGCCCGGC GGCTGCGTGA CGAATGGTTG
AAGAACCGCA GCGTCAACGC CGTCATGGCC TGGTTGTCGG CATTCGGACT GACCCATCAT
CAGGTCACCA CTCTGGTCGA AAGACTCGGC GGCAACTGCC TCGATATTCT GAAGGAAGAC
CCGTACATCC TCATTCGGGA GATCCGGGGA TTCGGCTTCA AGAAGGTCGA TAAGATCGCC
CGCAAGCTTG GCACCCCCAA GGACCACACC CCTCGTATCC GCGCTGGGTT GAATTTCTGC
GTCCGTGAAG CCCTGGACAA TGGTCACTGC TGGATCGAAT ACGAGGATCT GGTGGACCAG
GCCAATCTGC TGCTGGTCAT GGATGCCCTG GACAGCCGGG TCCGCATCGA GAGCGCCCTC
GACGCGCTCA TCGAAGAACA GGCGCTTGCC TGCGATTCCC ACGGCGGACG TTTCGTGGTC
GCTCTGCCGG AGATCGTCCG CATGGAGCGG GAGCTGGCCT TGTTGTTCGG CCAGGCCGAA
ACACCGAATC CTCATTTCCA GTCCGTCAAG AAACTCGATG CCCTGATTCG GCGCTGCGCA
TCAACGCTGA ACGAGAAGCA GCTCGACGCG GTCCGCTCGG CCCTCCAGCA CAGCATCAGC
CTGATTTCGG GTGGAGCCGG TTCGGGCAAG AGCTACACCA TTTCGGTCAT CAACACCATC
TGCGAGGAGA GCGACCTGGA GGTCGTGCTC GCCGCGCCGA CCGGCAAGGC CGCCAAGCGC
CTGGAGGAAG TCAGCGGTCG CAGCGGCACC ACCATTCACC GTCTGCTCGG CTATGACGGC
AAGGGTTTCT CGCGCAGCAA GGAGAATCCC ATCGATGCCG ACGTCTTGGT GGTCGACGAG
TTTTCGATGG TCGACGTGCC GCTGGCCTGG CACCTGTTCG AGGCGGTCGA TTTGTCGCGG
ACCACGGTGC TGCTGGTCGG GGACCACAAC CAGCTTCCGC CGGTGGGACC CGGAAACATA
CTGCGCGATC TGATCCAGAC ACGCGCCATC CCCACGGTCA TCCTCGACAA GGTCGTGCGC
CAGGCTGGCG TCCTCAAGGA GAACTGCACC GCCGTTCTCA AGGGCGAGGT GCGCAAGACC
AGCGAGGCGT CGGTATCCGG ATGCCGGGAT TGGTACCTGG TAGATCAGTT CACCGATCCG
ATGGCTGCAC GCTCGTTCCT GCTGGAGCTG TTTCAGGAGC GGCTCGACAC CCTGGGATTC
GACATCATCA AGGACGTGCA GGTGCTGACG CCGACCCACA AGGGACCGCT CGGCACCAAG
GAACTGAACG AGGAACTGCA GCGGCTCATC CAGCGCAAGC TCTGGAACAC CGAGGTGCCG
CCGGTCGCCA TGGGCCGCCG CGCCCCGTTT CTCAAGCACG ACAAGGTCAT CCAGACCCGG
AACAACTACG ATCTGAACGT GATGAACGGG GCCATCGGCT ATGTGGTCGA TGTCCTCGCG
AACGGCACCC TGGTCATCGA CTTCGACGGC ATGCCGGTGG AGCTGGAGAA GGGTTCGCCC
GACCTGCAGG ATCTGCAGCT CGCCTATGCG CTCACCATCC ACAAAACCCA GGGTTCCGAG
TTCCCCTGCG CCGTCGTGGT GATCCACAAG GCGCATTCCT TCATGCATCA CCGCAACCTG
CTCTACACCG GGGTGACCCG CGCCCGGCGC ACCGCCATTG TCCTGGGCGA CCATTGGGGC
ATCCAGAACT GCGCCAAGCG TTGCCAGGTG GATGACCGCC GGACCTTCCT GCCCCTGTTT
CTGGACGCCG CCCAGCACGC GGATGCCGAT TCCGCCCGTG TCGCGGAGGC CGAATGA
 
Protein sequence
MFARENQPVV LLGSWATHPK YGRQFKVDGM EHDLELDPEG LIHYLANHPE IKGIGPAKAR 
LIVESFGDAF EETLLNDPER IALKARLPLD AARRLRDEWL KNRSVNAVMA WLSAFGLTHH
QVTTLVERLG GNCLDILKED PYILIREIRG FGFKKVDKIA RKLGTPKDHT PRIRAGLNFC
VREALDNGHC WIEYEDLVDQ ANLLLVMDAL DSRVRIESAL DALIEEQALA CDSHGGRFVV
ALPEIVRMER ELALLFGQAE TPNPHFQSVK KLDALIRRCA STLNEKQLDA VRSALQHSIS
LISGGAGSGK SYTISVINTI CEESDLEVVL AAPTGKAAKR LEEVSGRSGT TIHRLLGYDG
KGFSRSKENP IDADVLVVDE FSMVDVPLAW HLFEAVDLSR TTVLLVGDHN QLPPVGPGNI
LRDLIQTRAI PTVILDKVVR QAGVLKENCT AVLKGEVRKT SEASVSGCRD WYLVDQFTDP
MAARSFLLEL FQERLDTLGF DIIKDVQVLT PTHKGPLGTK ELNEELQRLI QRKLWNTEVP
PVAMGRRAPF LKHDKVIQTR NNYDLNVMNG AIGYVVDVLA NGTLVIDFDG MPVELEKGSP
DLQDLQLAYA LTIHKTQGSE FPCAVVVIHK AHSFMHHRNL LYTGVTRARR TAIVLGDHWG
IQNCAKRCQV DDRRTFLPLF LDAAQHADAD SARVAEAE