Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1922 |
Symbol | |
ID | 3756925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1974891 |
End bp | 1976987 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637782806 |
Product | ATP-dependent RecD/TraA family DNA helicase |
Protein accession | YP_388414 |
Protein GI | 78356965 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0245308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCGCCC GGGAAAATCA GCCTGTGGTC CTGCTCGGGT CGTGGGCCAC CCATCCCAAA TACGGCCGTC AGTTCAAGGT CGACGGGATG GAGCACGACC TCGAACTCGA TCCGGAGGGG CTGATCCACT ATCTGGCCAA CCATCCGGAG ATCAAGGGCA TTGGTCCGGC CAAGGCCAGA TTGATCGTCG AGAGTTTCGG CGACGCCTTT GAAGAAACCC TTCTGAATGA CCCCGAGCGC ATCGCGCTCA AAGCTCGGCT GCCCTTGGAT GCTGCCCGGC GGCTGCGTGA CGAATGGTTG AAGAACCGCA GCGTCAACGC CGTCATGGCC TGGTTGTCGG CATTCGGACT GACCCATCAT CAGGTCACCA CTCTGGTCGA AAGACTCGGC GGCAACTGCC TCGATATTCT GAAGGAAGAC CCGTACATCC TCATTCGGGA GATCCGGGGA TTCGGCTTCA AGAAGGTCGA TAAGATCGCC CGCAAGCTTG GCACCCCCAA GGACCACACC CCTCGTATCC GCGCTGGGTT GAATTTCTGC GTCCGTGAAG CCCTGGACAA TGGTCACTGC TGGATCGAAT ACGAGGATCT GGTGGACCAG GCCAATCTGC TGCTGGTCAT GGATGCCCTG GACAGCCGGG TCCGCATCGA GAGCGCCCTC GACGCGCTCA TCGAAGAACA GGCGCTTGCC TGCGATTCCC ACGGCGGACG TTTCGTGGTC GCTCTGCCGG AGATCGTCCG CATGGAGCGG GAGCTGGCCT TGTTGTTCGG CCAGGCCGAA ACACCGAATC CTCATTTCCA GTCCGTCAAG AAACTCGATG CCCTGATTCG GCGCTGCGCA TCAACGCTGA ACGAGAAGCA GCTCGACGCG GTCCGCTCGG CCCTCCAGCA CAGCATCAGC CTGATTTCGG GTGGAGCCGG TTCGGGCAAG AGCTACACCA TTTCGGTCAT CAACACCATC TGCGAGGAGA GCGACCTGGA GGTCGTGCTC GCCGCGCCGA CCGGCAAGGC CGCCAAGCGC CTGGAGGAAG TCAGCGGTCG CAGCGGCACC ACCATTCACC GTCTGCTCGG CTATGACGGC AAGGGTTTCT CGCGCAGCAA GGAGAATCCC ATCGATGCCG ACGTCTTGGT GGTCGACGAG TTTTCGATGG TCGACGTGCC GCTGGCCTGG CACCTGTTCG AGGCGGTCGA TTTGTCGCGG ACCACGGTGC TGCTGGTCGG GGACCACAAC CAGCTTCCGC CGGTGGGACC CGGAAACATA CTGCGCGATC TGATCCAGAC ACGCGCCATC CCCACGGTCA TCCTCGACAA GGTCGTGCGC CAGGCTGGCG TCCTCAAGGA GAACTGCACC GCCGTTCTCA AGGGCGAGGT GCGCAAGACC AGCGAGGCGT CGGTATCCGG ATGCCGGGAT TGGTACCTGG TAGATCAGTT CACCGATCCG ATGGCTGCAC GCTCGTTCCT GCTGGAGCTG TTTCAGGAGC GGCTCGACAC CCTGGGATTC GACATCATCA AGGACGTGCA GGTGCTGACG CCGACCCACA AGGGACCGCT CGGCACCAAG GAACTGAACG AGGAACTGCA GCGGCTCATC CAGCGCAAGC TCTGGAACAC CGAGGTGCCG CCGGTCGCCA TGGGCCGCCG CGCCCCGTTT CTCAAGCACG ACAAGGTCAT CCAGACCCGG AACAACTACG ATCTGAACGT GATGAACGGG GCCATCGGCT ATGTGGTCGA TGTCCTCGCG AACGGCACCC TGGTCATCGA CTTCGACGGC ATGCCGGTGG AGCTGGAGAA GGGTTCGCCC GACCTGCAGG ATCTGCAGCT CGCCTATGCG CTCACCATCC ACAAAACCCA GGGTTCCGAG TTCCCCTGCG CCGTCGTGGT GATCCACAAG GCGCATTCCT TCATGCATCA CCGCAACCTG CTCTACACCG GGGTGACCCG CGCCCGGCGC ACCGCCATTG TCCTGGGCGA CCATTGGGGC ATCCAGAACT GCGCCAAGCG TTGCCAGGTG GATGACCGCC GGACCTTCCT GCCCCTGTTT CTGGACGCCG CCCAGCACGC GGATGCCGAT TCCGCCCGTG TCGCGGAGGC CGAATGA
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Protein sequence | MFARENQPVV LLGSWATHPK YGRQFKVDGM EHDLELDPEG LIHYLANHPE IKGIGPAKAR LIVESFGDAF EETLLNDPER IALKARLPLD AARRLRDEWL KNRSVNAVMA WLSAFGLTHH QVTTLVERLG GNCLDILKED PYILIREIRG FGFKKVDKIA RKLGTPKDHT PRIRAGLNFC VREALDNGHC WIEYEDLVDQ ANLLLVMDAL DSRVRIESAL DALIEEQALA CDSHGGRFVV ALPEIVRMER ELALLFGQAE TPNPHFQSVK KLDALIRRCA STLNEKQLDA VRSALQHSIS LISGGAGSGK SYTISVINTI CEESDLEVVL AAPTGKAAKR LEEVSGRSGT TIHRLLGYDG KGFSRSKENP IDADVLVVDE FSMVDVPLAW HLFEAVDLSR TTVLLVGDHN QLPPVGPGNI LRDLIQTRAI PTVILDKVVR QAGVLKENCT AVLKGEVRKT SEASVSGCRD WYLVDQFTDP MAARSFLLEL FQERLDTLGF DIIKDVQVLT PTHKGPLGTK ELNEELQRLI QRKLWNTEVP PVAMGRRAPF LKHDKVIQTR NNYDLNVMNG AIGYVVDVLA NGTLVIDFDG MPVELEKGSP DLQDLQLAYA LTIHKTQGSE FPCAVVVIHK AHSFMHHRNL LYTGVTRARR TAIVLGDHWG IQNCAKRCQV DDRRTFLPLF LDAAQHADAD SARVAEAE
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