Gene Dde_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1875 
Symbol 
ID3756878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1927505 
End bp1928422 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID637782759 
ProductPhage baseplate assembly protein W-like 
Protein accessionYP_388367 
Protein GI78356918 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0244529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTACG ACTTTCTCGG CAAGGGGCTG CGTTACCCGT TCCGGTTTCA GTCGGTATCC 
GGCGGCACCC AGGTCTCGAC CGCCACCTCG CGGGAGCACG AGCATATCCG CGAAAGCATC
CTGCAGATCC TCGGCACCCG GATCGGCGAA CGGTTCATGA ATCCGGAGTT CGGCTCCCGG
CTGAAGGATC TGGTGTTCGA ACAGAACGAC GAGGTGCTCA AGGGCCTGCT GCGCCATTAC
GTGATCGACG CCATCAAGCG CTGGGAAAAG CGGGTGATCA TCACGGAGGT ACACTTCGAC
GACCGGCCGC TGAACATCGA CGGCAACCTG CTGCTGGTGC ATATCGCCTA CCGGGTGATC
CAGAGCCAGG TGGACGGCAA CCTGGTCTAT CCCTTCTACA GAGAAGACCC GAACAATCCC
GCGCCCAGCT ATCCCCAGCC GGAGCCCGAG CCAGAACCGC CGCCGGTGCG CAGCGTGCGC
CTGTCGCCGG ACGTGCGCAC GCTGTTCAAT CTGCTCTGGT TCGACGCGGC CGAGATGAGC
CCCGATCCGG ACGACTCCTT GATCTGGCCA GCCGGGGAAT ACGAAGTCGC CTACATCGAG
GGAGCCTTTC AGGACCGCAA CGGCAAGTGG ATCGTCAGCG ATCCGGGTGA CAACCACGGC
CATTACCTGA CGTTCGAGGG AGCGCCAGAA ACAGAAGCGC CCCAGGCCGA GCACGCCCTC
TATCTGGCCG CGAGCGGTCT AGGCTTCGAC ACCCAGAGCC AGGCGGAAGA CAACGCCGCT
GGCACCGTTC ACCGGATCAC CACGTTGGAG CCGGGCCGCA TCGGTCTGTT CTATTTCGAG
GGCAAGAAGG AATCCCACTA CCTCAACAAC ACATCCGGGC AGCCCAATCC CGTCTGGCAA
CTGCGCGGCC CGCTCTGA
 
Protein sequence
MSYDFLGKGL RYPFRFQSVS GGTQVSTATS REHEHIRESI LQILGTRIGE RFMNPEFGSR 
LKDLVFEQND EVLKGLLRHY VIDAIKRWEK RVIITEVHFD DRPLNIDGNL LLVHIAYRVI
QSQVDGNLVY PFYREDPNNP APSYPQPEPE PEPPPVRSVR LSPDVRTLFN LLWFDAAEMS
PDPDDSLIWP AGEYEVAYIE GAFQDRNGKW IVSDPGDNHG HYLTFEGAPE TEAPQAEHAL
YLAASGLGFD TQSQAEDNAA GTVHRITTLE PGRIGLFYFE GKKESHYLNN TSGQPNPVWQ
LRGPL