Gene Dde_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1854 
Symbol 
ID3756857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1903655 
End bp1904623 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID637782738 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_388346 
Protein GI78356897 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0304514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCG CCTTTGTTGC TGTGATTTTT GGCCTGGCGC TGCTGGTCTG GAGCGCCGAC 
CGTTTTGTGG AGGGATCTGC CTCCACCGCC CGTCATTTCG GCATGCCGCC GCTGTTGATC
GGCATGGTGA TCGTGGGTTT CGGCACCTCC GCGCCGGAGA TGGTGGTGTC GGCACTGGCC
GCCTCGCAGG GCAATCCGGG CATCGCGCTG GGCAACGCCT ACGGGTCGAA CATCACCAAC
ATCGCCCTGA TCCTGGGGGT GACCGCACTG ATCAGCCCTA TAGCCGTCCA TTCGCAGGTG
CTGCGCAAAG AGCTGCCCAT CCTCACGGTG GTGACTGCAC TGGCGGCCTG GCAACTCTGG
GATGGCAAAA TAACCCGGCT TGATGCCATC GTGTTGCTGA CCGTGTTCGG CGGCCTGATG
GCCTGGACCA TCTGGCAGGG TATGCAGAAA AAAGCCGATG CGCTGGGGAG CGAGATGGAG
CAGGAACTCG ACGTTCGCGC CATGCCCATT CGCCGTGCGG TCTTCTGGCT GTCAGTGGGC
CTGGTGCTGC TCGTCGTCAG CTCCCGCATC CTGGTCTGGG GCGCGGTGGA GATCGCTCAT
GGATTCGGGG TCAGCGACCT GATCATCGGC TTGACCATCG TCGCGGTGGG CACCTCGCTG
CCGGAACTGG CCTCGTCGAT TATCGCCACC CGCAAGGGGG AACATGACAT CGCGCTGGGC
AACGTTCTTG GGTCCAACCT GTTCAACACC CTGGCGGTGG TGGGGATCGC CGGTGCGATT
CACCCGATGG CGATCGGACC GGAAGTTTTC AACCGCGACA TGATGGTGAT GGCTGGGCTG
ACCCTTTCGC TCTTCGTGTT CGGCTACGGA TTCCGTGGAC CGGGACGTAT CAACCGCCTT
GAAGGCGCGG TGCTGCTGGC CTGTTACGTG GGCTATACGG CCTACCTGAT CACAACGATT
CTGGCATGA
 
Protein sequence
MTLAFVAVIF GLALLVWSAD RFVEGSASTA RHFGMPPLLI GMVIVGFGTS APEMVVSALA 
ASQGNPGIAL GNAYGSNITN IALILGVTAL ISPIAVHSQV LRKELPILTV VTALAAWQLW
DGKITRLDAI VLLTVFGGLM AWTIWQGMQK KADALGSEME QELDVRAMPI RRAVFWLSVG
LVLLVVSSRI LVWGAVEIAH GFGVSDLIIG LTIVAVGTSL PELASSIIAT RKGEHDIALG
NVLGSNLFNT LAVVGIAGAI HPMAIGPEVF NRDMMVMAGL TLSLFVFGYG FRGPGRINRL
EGAVLLACYV GYTAYLITTI LA