Gene Dde_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1838 
Symbol 
ID3756841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1889175 
End bp1890377 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content54% 
IMG OID637782722 
Producthypothetical protein 
Protein accessionYP_388330 
Protein GI78356881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000787554 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG GACAGAATTT CAGGCGTTGC CGCTTTTTGT GCAGCGCATT TTTTGTATTA 
CTGCTGTCAT GCTGCATTGT TACAGTGCAG CATGCGGCAG CAAAAACTGA TGACCAGACA 
CCACGCACCA GTCAGGAGGT CAACAGCGCC CTTGATACGC TGCTTGCGGC AGTCACTGAC 
AAAACGATCC CTCTGACAGC GGAAAACCTT GAACCGCTGC TTGAACTTGT AGTCGGAAAA 
AACGCAACGC CGGACTCGCT GCCCCAGCCT TCCAAGAATG AGGCGGGGAG CGGTATTTTT 
CTGAGAGATA CCATCAATGT CCCGCTGACG ACCTTTTTGG AATACTGCTA CGATCCTGCC 
ATTTCACCGG CAGCCCTGTT TCCTGCCAGC GTCCGTCTGG GCCACTGGAA GCCCGGCAGT 
GATATCTTTG CCGCTGCCCC GCTGTGGAAG CAGGCGGAAA ATCTGAACGA CATGCATATA 
CTGCGCGGCA CGGAGTACGA AGAAATCACC CCCGACCACT TCAGCGGGTG CTACTACGGA 
TACGACCTGC ACAGGCTGCT TATACTCATG CCGTGGAACG GAAAACGCGT GTTTATCAGT 
GTGTCGCGTC AGGCCGGACC TTCCGGCGTA GGGCTGAAAG GAGCCATTGT GGGCGACGAC 
AGTGACTGGG AGTATGTTTA CACAGGTGTC GAAGGCGGTA CAGCTCGCGC CATAGGCTGG 
ATGGATACCT ACATGTACGA CTCCGCCAGC GTGACTTTTT TCTTTGATGA CGAGACAGCT 
TCGCGCACCC GCTACGCCAT GTTCAAATGG CTGAAGGCCG GCTGGGCAGG GCTCAACGTT 
GTCAAAAAAA GCCATATCCA GTCGGGTACG GAACGTTTTC TGAAAGGCTT CAAGGCGGTA 
ATAGAATCAC CGCGTCTTCC GCCTGCCGGC GAGATCGCAA CCTATGCCGA AAAGCTGAAA 
ATGCAACCGG AAGAAGAACA GATTGCAAGC CTTGCCCGGT ACAGCGCCAG ACTTGAAGAG 
ATTTCCGCCG AAGACAGCAT TCTGAAACGT GATGACTTTC AGCAGGTACT CAGAAACGGC 
GGATACGGTG CATCGCTGAC GGCAGAACAA CGCGCAGGGG TTCTGGTAAA ACAGTACATC 
AAGCACCAGA TTGGCAAGTC GCCCCTTGCG GGGCTGGAAC AACACACACA GCCTGAAGGA 
TGA
 
Protein sequence
MNTGQNFRRC RFLCSAFFVL LLSCCIVTVQ HAAAKTDDQT PRTSQEVNSA LDTLLAAVTD 
KTIPLTAENL EPLLELVVGK NATPDSLPQP SKNEAGSGIF LRDTINVPLT TFLEYCYDPA 
ISPAALFPAS VRLGHWKPGS DIFAAAPLWK QAENLNDMHI LRGTEYEEIT PDHFSGCYYG 
YDLHRLLILM PWNGKRVFIS VSRQAGPSGV GLKGAIVGDD SDWEYVYTGV EGGTARAIGW 
MDTYMYDSAS VTFFFDDETA SRTRYAMFKW LKAGWAGLNV VKKSHIQSGT ERFLKGFKAV 
IESPRLPPAG EIATYAEKLK MQPEEEQIAS LARYSARLEE ISAEDSILKR DDFQQVLRNG 
GYGASLTAEQ RAGVLVKQYI KHQIGKSPLA GLEQHTQPEG