Gene Dde_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1836 
Symbol 
ID3756839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1886792 
End bp1887931 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content60% 
IMG OID637782720 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_388328 
Protein GI78356879 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00266206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCT CGTCCGGCAT TCTGATGCAC AGCATGCTGT GCAGGCGCGG CGGTGCGGCA 
CGGGTGGCCA CCCTGCTGCA CAACGAACTT TGTGCACCGG AAATGCCATA CCGCGTTGTC
CGCAGCACAG AATACGACGA CAGTGACCCG CTCCTGCCTG AAGAGGGGCA ATGTCAGTGC
ATAACAACAG CACCTGCCCG GAGCTTATTC TCTGAGCCCT GTGACGTTCT GCACCTGCAC
AGCACCTGCG ACTGGCAGCG CCTGCTGAGC GATGCCCAGC GCTTCTCGCA GGTGGTCATC
ACGCTGCACG ACGCATCGCT TCTCACCGGC GGCTGTCCTT TTCCGCTGGC GTGCAGTGGC
TGGAAGGACG GGTGTTCTGA CCCTTGCCCG CGCGGCTACC CGTATGCCGC AGCACGGCAG
GCCGCTCTCA GGGGGGCGCT GGAAAAGCTC TGTGCCGTGT CAGCCGTTCA GATGGTATCT
CCCAGCCTGT GGCTGAAAAA AATGGCCGGA CAGGCAGTTT CGGGCATACC CTGCCATGTG
ATACCCAACG GTGTTGAAGA TACATTTTTT ACGGAAGGAA AGAATGCAGC CCGGAAACGT
CTGGGCATTG CTGCAGCAGC CAGAGTCATA CTCATGCTTG CCCACGGAGG GCAGCAGGCG
GCATACAAGG CGGGTGAACA ATGGGAAGGA TTATGGCGGA GCGTGCGCGG CAGGCGCGAC
ATCATATGCA TAATGGCGGG CGGTGACAGC TGCCGGACAG AAGAACGTCT GCTGGTACTG
CCGTATCTTG ACCGCCGGCA CCTGTCGCTG GTGCTCACGG CCGCTGACCT GCTGGTGTAC
CCCACACTGG CGGACAATCA TCCTCTGGTG GTTCTTGAAG CTTTTTCAGC AGGTACCCCT
GTTGTGGCCT TTGCCGAGGG GGGCGTACCG GAACAGATCG ACCGCAAGAC AGGCAGGCTT
GTTCAGCCCG GAAACTGGCC CGCCATGACA GAACAGATTC TGCACCTGAC GGCAGACCGG
ACCGGACTGA AAAAAATGGG AGAAGCTGCA AGAACCTGCT GGTTGAACCG CTTTACTGCG
CGGCGTATGG CACAGGACTA TGTCAGACTG TATCACCGGC ACGGCCAGTC TGCGGAGTAA
 
Protein sequence
MTASSGILMH SMLCRRGGAA RVATLLHNEL CAPEMPYRVV RSTEYDDSDP LLPEEGQCQC 
ITTAPARSLF SEPCDVLHLH STCDWQRLLS DAQRFSQVVI TLHDASLLTG GCPFPLACSG
WKDGCSDPCP RGYPYAAARQ AALRGALEKL CAVSAVQMVS PSLWLKKMAG QAVSGIPCHV
IPNGVEDTFF TEGKNAARKR LGIAAAARVI LMLAHGGQQA AYKAGEQWEG LWRSVRGRRD
IICIMAGGDS CRTEERLLVL PYLDRRHLSL VLTAADLLVY PTLADNHPLV VLEAFSAGTP
VVAFAEGGVP EQIDRKTGRL VQPGNWPAMT EQILHLTADR TGLKKMGEAA RTCWLNRFTA
RRMAQDYVRL YHRHGQSAE