Gene Dde_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1834 
Symbol 
ID3756837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1883494 
End bp1885071 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content54% 
IMG OID637782718 
Productdiguanylate cyclase 
Protein accessionYP_388326 
Protein GI78356877 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.245567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGT TACTCAACAT ACTGATTTGC GATATTTTTA TTTTCACGGC GCAAAGGTTG 
CATGCAAGAT GGCAAGAAGA ATCACCCGAT GATATCGGGG GGGAGGATAT ATACGTGAAG
CGTAAGAATC CGCTTGTCAT GTGGGGCATA GCTCTTGAAA CAGAAGCGGC AGCCTTTCTG
GAACAGGCAG CCTGTAGCGG ATGCGTGCTG CATAACTGGG ATGGGCGTAT GCCTGATAAC
AGTGCGCTGG AATCCGATGA ACCGGTTCTG GTCTGGGTTT CACAGCGGGG ATGGGATGCT
GTGTCTGCTC TGCCGGACGA AGAAATGCAG TTTCTGCATC TTGTTCCCAG AGTTCTGTTG
TTGCAGCAGG ATGTTTCACC GGAGTATGTG GAACGGGCGC TTGATGCCGG TTTCACCGAC
ATTCTGAAGG CTCCTTTTTC TGAACCCAGA GTACGCGAAG TTTTTCTGCG TGCGGCGGAA
ATGCAGAACC TGTACGACGA TATCATCCGT ATGACCCGCG AGATATGCCT TGAACGTGAG
GTGCTCGCAC GAAAGAATGA TATTCTGGAG TTTATCGTCA CCTTTTTGTC CCGTGCCACA
GAAAGTCTTG ATCCTGTGGA AATTCTGAGC AACGCCCGGG AAGATTTGAG CATGCTGCTG
CCGCTGCGCG CGTTGCATGC CGCTTTGTGG CATCCGCAGC AGAAAGACTC CCTTGAAGCG
GAAGTGTTTC TGGGGGTGGG CGAGCACACG CAGGCCGGTC TTGAGTGGAG TCAGATGTTG
CTTAAGGCGG CGGCAAAGCT GAGCGGCGTG CCTGTTTCGG GCTACACGGT GGAGCAGCTT
GGGCAGGGAG GGGCGGAAGA TGCTCCCGCA CCGGGAAAAG TCATTCTGCT GCCTTTGAAA
ATGAGGGATG AGACGCTGGG CTGTCTTGCT CTGCTTACAG AGGATGACTG CCAGCTTGGC
AAAGATCAGG TTCAGGTGCT GCATTCTGCC ATGCGCCATC TGGCACTGGC GGTAAAAAAT
GCCCTGCTTT TCCGTGAAAT GCGTTTGCAG GCTGACCACG ACGGGCTGAC CCAGCTGCAC
AACAGACGCC ATTTCGATAC ACGGCTGCGT GAGGAACTGG ACAGGCACGG TCGCTACAGC
ATGCCGCTTA CCCTGATGAT GCTGGATATC GACTATTTTA AGCAGATCAA TGACCGTTTT
GGCCATCAGG CCGGCGATGC CGTTTTGCGG GAACTTGCCA GTGTGCTGCG TGAAACCATC
AGAACCACGG ATTACTGCGC ACGGTATGGC GGTGAAGAGT TTGTGGCCAT ATTGCCTCAT
ACCGATGAAC AGCAGGCACG CGTGCTGGCG GAACGGTTGA GAAAAAATAT AGAAAGCAGA
GTGTTCCGTC ACCATGGAAA AACAATACAG GCGACAGTGA GCATAGGGCT GACAGGCTTC
AAGCCGGGTG CGCTTACTCC GCGTGACGAA CTGGTGCGCG AAGCCGACGC GGCGTTGTAT
CTGGCCAAGG CCAACGGCAG AAATGTTGTG TGCACTTTTG CAGGCAGCTG CAATGAAAAG
GTAAAAAAGG CCCAGTAA
 
Protein sequence
MSSLLNILIC DIFIFTAQRL HARWQEESPD DIGGEDIYVK RKNPLVMWGI ALETEAAAFL 
EQAACSGCVL HNWDGRMPDN SALESDEPVL VWVSQRGWDA VSALPDEEMQ FLHLVPRVLL
LQQDVSPEYV ERALDAGFTD ILKAPFSEPR VREVFLRAAE MQNLYDDIIR MTREICLERE
VLARKNDILE FIVTFLSRAT ESLDPVEILS NAREDLSMLL PLRALHAALW HPQQKDSLEA
EVFLGVGEHT QAGLEWSQML LKAAAKLSGV PVSGYTVEQL GQGGAEDAPA PGKVILLPLK
MRDETLGCLA LLTEDDCQLG KDQVQVLHSA MRHLALAVKN ALLFREMRLQ ADHDGLTQLH
NRRHFDTRLR EELDRHGRYS MPLTLMMLDI DYFKQINDRF GHQAGDAVLR ELASVLRETI
RTTDYCARYG GEEFVAILPH TDEQQARVLA ERLRKNIESR VFRHHGKTIQ ATVSIGLTGF
KPGALTPRDE LVREADAALY LAKANGRNVV CTFAGSCNEK VKKAQ