| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1834 |
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| Symbol | |
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| ID | 3756837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1883494 |
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| End bp | 1885071 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637782718 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_388326 |
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| Protein GI | 78356877 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.245567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCGT TACTCAACAT ACTGATTTGC GATATTTTTA TTTTCACGGC GCAAAGGTTG
CATGCAAGAT GGCAAGAAGA ATCACCCGAT GATATCGGGG GGGAGGATAT ATACGTGAAG
CGTAAGAATC CGCTTGTCAT GTGGGGCATA GCTCTTGAAA CAGAAGCGGC AGCCTTTCTG
GAACAGGCAG CCTGTAGCGG ATGCGTGCTG CATAACTGGG ATGGGCGTAT GCCTGATAAC
AGTGCGCTGG AATCCGATGA ACCGGTTCTG GTCTGGGTTT CACAGCGGGG ATGGGATGCT
GTGTCTGCTC TGCCGGACGA AGAAATGCAG TTTCTGCATC TTGTTCCCAG AGTTCTGTTG
TTGCAGCAGG ATGTTTCACC GGAGTATGTG GAACGGGCGC TTGATGCCGG TTTCACCGAC
ATTCTGAAGG CTCCTTTTTC TGAACCCAGA GTACGCGAAG TTTTTCTGCG TGCGGCGGAA
ATGCAGAACC TGTACGACGA TATCATCCGT ATGACCCGCG AGATATGCCT TGAACGTGAG
GTGCTCGCAC GAAAGAATGA TATTCTGGAG TTTATCGTCA CCTTTTTGTC CCGTGCCACA
GAAAGTCTTG ATCCTGTGGA AATTCTGAGC AACGCCCGGG AAGATTTGAG CATGCTGCTG
CCGCTGCGCG CGTTGCATGC CGCTTTGTGG CATCCGCAGC AGAAAGACTC CCTTGAAGCG
GAAGTGTTTC TGGGGGTGGG CGAGCACACG CAGGCCGGTC TTGAGTGGAG TCAGATGTTG
CTTAAGGCGG CGGCAAAGCT GAGCGGCGTG CCTGTTTCGG GCTACACGGT GGAGCAGCTT
GGGCAGGGAG GGGCGGAAGA TGCTCCCGCA CCGGGAAAAG TCATTCTGCT GCCTTTGAAA
ATGAGGGATG AGACGCTGGG CTGTCTTGCT CTGCTTACAG AGGATGACTG CCAGCTTGGC
AAAGATCAGG TTCAGGTGCT GCATTCTGCC ATGCGCCATC TGGCACTGGC GGTAAAAAAT
GCCCTGCTTT TCCGTGAAAT GCGTTTGCAG GCTGACCACG ACGGGCTGAC CCAGCTGCAC
AACAGACGCC ATTTCGATAC ACGGCTGCGT GAGGAACTGG ACAGGCACGG TCGCTACAGC
ATGCCGCTTA CCCTGATGAT GCTGGATATC GACTATTTTA AGCAGATCAA TGACCGTTTT
GGCCATCAGG CCGGCGATGC CGTTTTGCGG GAACTTGCCA GTGTGCTGCG TGAAACCATC
AGAACCACGG ATTACTGCGC ACGGTATGGC GGTGAAGAGT TTGTGGCCAT ATTGCCTCAT
ACCGATGAAC AGCAGGCACG CGTGCTGGCG GAACGGTTGA GAAAAAATAT AGAAAGCAGA
GTGTTCCGTC ACCATGGAAA AACAATACAG GCGACAGTGA GCATAGGGCT GACAGGCTTC
AAGCCGGGTG CGCTTACTCC GCGTGACGAA CTGGTGCGCG AAGCCGACGC GGCGTTGTAT
CTGGCCAAGG CCAACGGCAG AAATGTTGTG TGCACTTTTG CAGGCAGCTG CAATGAAAAG
GTAAAAAAGG CCCAGTAA
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| Protein sequence | MSSLLNILIC DIFIFTAQRL HARWQEESPD DIGGEDIYVK RKNPLVMWGI ALETEAAAFL
EQAACSGCVL HNWDGRMPDN SALESDEPVL VWVSQRGWDA VSALPDEEMQ FLHLVPRVLL
LQQDVSPEYV ERALDAGFTD ILKAPFSEPR VREVFLRAAE MQNLYDDIIR MTREICLERE
VLARKNDILE FIVTFLSRAT ESLDPVEILS NAREDLSMLL PLRALHAALW HPQQKDSLEA
EVFLGVGEHT QAGLEWSQML LKAAAKLSGV PVSGYTVEQL GQGGAEDAPA PGKVILLPLK
MRDETLGCLA LLTEDDCQLG KDQVQVLHSA MRHLALAVKN ALLFREMRLQ ADHDGLTQLH
NRRHFDTRLR EELDRHGRYS MPLTLMMLDI DYFKQINDRF GHQAGDAVLR ELASVLRETI
RTTDYCARYG GEEFVAILPH TDEQQARVLA ERLRKNIESR VFRHHGKTIQ ATVSIGLTGF
KPGALTPRDE LVREADAALY LAKANGRNVV CTFAGSCNEK VKKAQ
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