Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1823 |
Symbol | |
ID | 3756826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1872443 |
End bp | 1874074 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637782707 |
Product | cytochrome-c oxidase |
Protein accession | YP_388315 |
Protein GI | 78356866 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0200006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACGG CTGACGCGGT TCAGACTTCC CGGGGCTTCT GGGGACCGTT GCAGGGCACA AAAAACAGCA TCGGTTCATG GATTTTTTCA ACAGACCACA AACGTATCGG CATACTGTAT TTCTATGGTA TAATAGGATT TTTCCTCGTG GGGCTGCTTC TTGGCTTTCT TGTACGCCTT GAGCTTATCG CCCCCGGAAA AACCATCATG GACGCGCAGA CATACAATGC CATATTCACG CTGCATGGCG TGGTCATGAT TTTTCTGGTG GTCATCCCCA GCATTCCGGC CGCATTCGGC AATATCTTTC TTCCCATTCA GATAGGGGCC GAGGATGTCT CCTTTCCCCG CCTGAACAAT TTTTCATGGT GGCTTTATGT CACCGGTGCA GTGCTCGCGC TCAGCTCTCT CTTTACGGGT GACGGTCCGC CGGACACGGG CTGGACGTTT TACGTCCCCT TCAGCAACGT GACCACCACA AACGTCAACG TGGCTCTTGC AGCCGTATTT GTTCTGGGTT TTTCTTCCAT ACTCACCGGC CTCAATTTCA TCACCACCAT CCACCGATTG CGGGCCGAGG GCATGACATG GACCCGGCTG CCTCTTTTTG TCTGGTCGCT GTATGCCACC GGCTGGATTC AGGTACTCGC CACTCCGGTG CTTGGTATCA CCGTGCTGCT GGTTGTGGTT GAAAGGGTAA TGGGGGTGGG GCTGTTTGAC GCCACCAAAG GCGGCGACCC GCTGCTGTAT CAGCACCTTT TCTGGATATA TTCACACCCG GCCGTGTACA TAATGATTCT GCCCGCCATG GGTGTAATTT CCGAAATAAT TCCGGTATTT TCCCGCAAGA AAATCTTCGG CTACAAGATG ATCGCTTTTT CCAGCCTTGC CATAGCCTTT GCGGGTTCAC TGGTATGGGC GCATCATATG TTCACCAGCG GCATGAGCGA TACCGCAGTG CTGGTTTTTT CGTTTCTCAC ATTTGTCGTC GCCATTCCTT CTGCCATCAA GGTGTTCAAC TGGGTTTCCA CCATGTTCAA GGGGTCCATC TATCTTGAAC CGCCCATGTA CTACGCCATG GCGTTCATCT TTCTCTTTTC CATAGGTGGG CTTACCGGAC TGGTGCTGGG CGGGGCCGGA ACTGATATCC ATGTGCATGA TACATATTTT GTTGTCGCGC ACTTCCATTA TGTCATTTTC GGCGGGCTCG GGTTCGGTCT GTTCGGAGCC ATGCATTACT GGTTCCCCAA AATATACGGA AAGATGTATA ACAAAAGAGT GGCCAACATC TCCTGTCTGG TTACTTTCAT CGGTTTCAAC GTTCTGTACT TTCCGCTTTT CGTCATCGGC CTGCAGGGCA TGCCGCGCAG ATATTACGAC TATCTGCCGC AGTACACCAC GGGGCATTTC ATTTCCACAG TAGGATCCTG GATTCTGGCC GCAGGGCTTC TGCTCATGCT GTGGAATCTG TTCAAGGGAG CACGCAGCGG CCCCCGGGCC GGTGACAATC CTTGGAACGC CGTGACATTG GAATGGCAGG TTCCTTCTCC TCCCCCGCAT CACAACTTTG TTGAAGAACC TGTGGTCACA CACGGGCCGT ACGACTTCAG GGAGGTGACT TCCGATGAGT AA
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Protein sequence | MATADAVQTS RGFWGPLQGT KNSIGSWIFS TDHKRIGILY FYGIIGFFLV GLLLGFLVRL ELIAPGKTIM DAQTYNAIFT LHGVVMIFLV VIPSIPAAFG NIFLPIQIGA EDVSFPRLNN FSWWLYVTGA VLALSSLFTG DGPPDTGWTF YVPFSNVTTT NVNVALAAVF VLGFSSILTG LNFITTIHRL RAEGMTWTRL PLFVWSLYAT GWIQVLATPV LGITVLLVVV ERVMGVGLFD ATKGGDPLLY QHLFWIYSHP AVYIMILPAM GVISEIIPVF SRKKIFGYKM IAFSSLAIAF AGSLVWAHHM FTSGMSDTAV LVFSFLTFVV AIPSAIKVFN WVSTMFKGSI YLEPPMYYAM AFIFLFSIGG LTGLVLGGAG TDIHVHDTYF VVAHFHYVIF GGLGFGLFGA MHYWFPKIYG KMYNKRVANI SCLVTFIGFN VLYFPLFVIG LQGMPRRYYD YLPQYTTGHF ISTVGSWILA AGLLLMLWNL FKGARSGPRA GDNPWNAVTL EWQVPSPPPH HNFVEEPVVT HGPYDFREVT SDE
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