| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1819 |
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| Symbol | secF |
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| ID | 3756822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1869872 |
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| End bp | 1870942 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782703 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_388311 |
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| Protein GI | 78356862 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000814771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTGT CCATAATAAA GCCCGATATC AATATTGATT TTGTCGGTCT GCGCAAAATA
TCTCTGTGCC TTTCCGGAGT GGTTCTCCTT GTCGGGCTGC TTTCGCTTTT CATCAAAGGC
GGCCCGAGCT ACGGAATTGA CTTTGCCGGC GGGGTGGTGG TGCAGGTGCA GTTTGACCGC
TCCGTCGAGC CGGCCGCCAT CAAGAGCAGT CTGGAAGACC TTAACCTTCC TGGACTGAGC
GTGCAGCGTT TCGGAGACAG CGCAGACAAT GAATACCTCG TGCGCGTTTC GCAGGCGGGA
GAAAATCCCG AAGATCTGCG CAGTGACATT GCACAGGCTT TTACCGGAAA ACTTCCGGGG
GCCAGCTATG AAATCAAACG GCTGGAAATG GTAGGCCCGA AAGTAGGGGC CGATCTGCGC
TCGAAAGCGG TTGAAGCTCT TTACTTCGCC GTGCTGCTCA TTGCCATTTA CATCTCAGGC
CGTTTTGAAC AACGCTGGTT CACCGCGGGT ATCATGGCCG CGGCCCTTGC CACCGGCATG
TATCTGCTGG GCCAGCTGGG CATAAGCAAA GCAGGTCTGG TGTTTGCCGC CTTGCTGCTT
ACGCTTGCGC TCTGCTGGAA GCTGAAGCTC AACTTCGCAC TGGGGGCGCT TGTGGCGCTC
ATACACGACG TAACCATTAC GGTGGGGCTT TTTTCCTTGC TGGACAAGGA GTTTGACCTG
ACCATCGTGG CAGCGCTGCT GACCATTATC GGGTACTCGC TGAACGACAC CATCATTGTC
TACGACCGTA TCCGCGAATA CCGGCTGTCG CACCAGAACG AATCGCTCGG CTCGGTAATC
AACCTGGCCA TCAACCAGAC GTTGAGCCGG ACCATCCTGA CATCCGGCAC CACGCTGCTT
GTCATCATCA CGCTGTACTT CCTTGGAGGC GGCGTTATCC ACGACTTCGC GCTGGCCATG
CTGATAGGTG TGGGCGTAGG TACCTATTCG TCCATCTTCG TCGCAAGCCC CATCCTGCTC
ATGCTCGGGG TGGATGTGCC TGCAGAAGAA CCTGCTCAGG ATACCCCCTG A
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| Protein sequence | MGLSIIKPDI NIDFVGLRKI SLCLSGVVLL VGLLSLFIKG GPSYGIDFAG GVVVQVQFDR
SVEPAAIKSS LEDLNLPGLS VQRFGDSADN EYLVRVSQAG ENPEDLRSDI AQAFTGKLPG
ASYEIKRLEM VGPKVGADLR SKAVEALYFA VLLIAIYISG RFEQRWFTAG IMAAALATGM
YLLGQLGISK AGLVFAALLL TLALCWKLKL NFALGALVAL IHDVTITVGL FSLLDKEFDL
TIVAALLTII GYSLNDTIIV YDRIREYRLS HQNESLGSVI NLAINQTLSR TILTSGTTLL
VIITLYFLGG GVIHDFALAM LIGVGVGTYS SIFVASPILL MLGVDVPAEE PAQDTP
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