Gene Dde_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1772 
Symbol 
ID3756772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1826649 
End bp1827221 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID637782653 
ProductSSU ribosomal protein S30P / sigma 54 modulation protein 
Protein accessionYP_388264 
Protein GI78356815 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0457301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATA CTGAATCTCT GGAGGTTTTT ATGAACATCG CTTTCACTTT CAAGAACTTC 
GAGCCTTCCG ATCACTTGAA AAAGTATGCC AACCGCCGTT TTGAAAAGCT CGGACGCTTT
TTGAATAAGT CAGAAAACCT TGAGTTACAG GTTCTGTTGA GCGTTGATAA ATTCCGGCAC
AAGGCGGAAG TACAATGCAC GGGCGAGGGG TTGAATCTCT CTGCAGTGGA GCAGAGCGAG
GATATGTATG CCACTATTGA TCTTGTGCTG GATAAGCTGG AAGCACAGGT CAAGAAACAC
GCAGAAAAGA CTAAGGATCG GCGCCGTTCC AGCAGTGATG ACAGCGTGCG TATGGATGTG
TTCAATTACA AAAACAATGA CGGCGTGCGC GAGCGCACCA TCATTGAAAC TGATGAGATT
GATCCCAAAC CCATGCATAT TGATGAAGCT GCCATGCAGC TTGAGGCGCT GGATTACGAG
TTTCTCGTTT TCAAAAACGC GCAGAACAAC CGCGTGAATG TCATCTACCG TCGCAAGGAC
GGAGACTTCG GGCTGATCGA TCCGGGATTC TAA
 
Protein sequence
MPDTESLEVF MNIAFTFKNF EPSDHLKKYA NRRFEKLGRF LNKSENLELQ VLLSVDKFRH 
KAEVQCTGEG LNLSAVEQSE DMYATIDLVL DKLEAQVKKH AEKTKDRRRS SSDDSVRMDV
FNYKNNDGVR ERTIIETDEI DPKPMHIDEA AMQLEALDYE FLVFKNAQNN RVNVIYRRKD
GDFGLIDPGF