Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1772 |
Symbol | |
ID | 3756772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1826649 |
End bp | 1827221 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637782653 |
Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
Protein accession | YP_388264 |
Protein GI | 78356815 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0457301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATA CTGAATCTCT GGAGGTTTTT ATGAACATCG CTTTCACTTT CAAGAACTTC GAGCCTTCCG ATCACTTGAA AAAGTATGCC AACCGCCGTT TTGAAAAGCT CGGACGCTTT TTGAATAAGT CAGAAAACCT TGAGTTACAG GTTCTGTTGA GCGTTGATAA ATTCCGGCAC AAGGCGGAAG TACAATGCAC GGGCGAGGGG TTGAATCTCT CTGCAGTGGA GCAGAGCGAG GATATGTATG CCACTATTGA TCTTGTGCTG GATAAGCTGG AAGCACAGGT CAAGAAACAC GCAGAAAAGA CTAAGGATCG GCGCCGTTCC AGCAGTGATG ACAGCGTGCG TATGGATGTG TTCAATTACA AAAACAATGA CGGCGTGCGC GAGCGCACCA TCATTGAAAC TGATGAGATT GATCCCAAAC CCATGCATAT TGATGAAGCT GCCATGCAGC TTGAGGCGCT GGATTACGAG TTTCTCGTTT TCAAAAACGC GCAGAACAAC CGCGTGAATG TCATCTACCG TCGCAAGGAC GGAGACTTCG GGCTGATCGA TCCGGGATTC TAA
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Protein sequence | MPDTESLEVF MNIAFTFKNF EPSDHLKKYA NRRFEKLGRF LNKSENLELQ VLLSVDKFRH KAEVQCTGEG LNLSAVEQSE DMYATIDLVL DKLEAQVKKH AEKTKDRRRS SSDDSVRMDV FNYKNNDGVR ERTIIETDEI DPKPMHIDEA AMQLEALDYE FLVFKNAQNN RVNVIYRRKD GDFGLIDPGF
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