Gene Dde_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1766 
Symbol 
ID3756766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1821817 
End bp1822635 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content57% 
IMG OID637782647 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_388258 
Protein GI78356809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTT CTACGACAGA ACTCTATAAA ACCCTGTGCG ACGGCCCGTT TATCATTGCA 
GGCCCCTGCG TGCTCGAAAG CTACGAGCTG GCGCTTGAAA CTGCCCGCAT TGTGCGTGAG
GCTGCGGACA GACATGCTGT CACAGCAATT TTTAAAAGCT CTTTTGACAA GGCCAACCGT
ACATCGGCCT CCAGCTTCCG CGGCCCCGGA ATGACTACGG GGCTGGAGTG GCTGGCCCGC
ATCCGCGAAG AAACGGGCCT GCCTGTCATT ACCGATATTC ATGAACCTGC TCAGGCCGCA
CCTGTGGCAG CTGTGGCTGA CATTTTGCAA ATACCGGCAT TTCTGTGCAG GCAGACAGCC
CTGCTGCAGG CGGCTGCCGC CACCGGCAGC GTGGTCAATG TAAAGAAAGG CCAGTTTGTG
GCGCCTTGGG ATATGGGGCC AGTGGTGGAA AAACTGCATG CGGCAGGAAA CCGTCACGTG
ATGCTTACCG AAAGAGGGGC AAGTTTCGGC TATAACAATC TTGTGGTCGA TTTCCGCTCT
TTTTCCATCA TGCGCAGCCT GAATGTTCCT GTAATTTTCG ATGCCACCCA TTCCGTACAG
CTTCCGGGCG GGCAGGGTTC CTGCTCCGGA GGGGACAGAA GGCATGTTCC TGCACTGGCC
CGCGCAGCTG TGGCAGCAGG TGCAAACGGG GTTTTTCTGG AATGTCATCC CGACCCCGAC
AAGGCGCTGT GCGACGGCCC CAACAGCTGG CCCGCGGGGC GCCTGAGCGA TCTTGTAGGA
GATCTGAAGA GCATCTGGAG TATTGACTAT GCGTGTTAA
 
Protein sequence
MTFSTTELYK TLCDGPFIIA GPCVLESYEL ALETARIVRE AADRHAVTAI FKSSFDKANR 
TSASSFRGPG MTTGLEWLAR IREETGLPVI TDIHEPAQAA PVAAVADILQ IPAFLCRQTA
LLQAAAATGS VVNVKKGQFV APWDMGPVVE KLHAAGNRHV MLTERGASFG YNNLVVDFRS
FSIMRSLNVP VIFDATHSVQ LPGGQGSCSG GDRRHVPALA RAAVAAGANG VFLECHPDPD
KALCDGPNSW PAGRLSDLVG DLKSIWSIDY AC