Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1766 |
Symbol | |
ID | 3756766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1821817 |
End bp | 1822635 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637782647 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_388258 |
Protein GI | 78356809 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTTT CTACGACAGA ACTCTATAAA ACCCTGTGCG ACGGCCCGTT TATCATTGCA GGCCCCTGCG TGCTCGAAAG CTACGAGCTG GCGCTTGAAA CTGCCCGCAT TGTGCGTGAG GCTGCGGACA GACATGCTGT CACAGCAATT TTTAAAAGCT CTTTTGACAA GGCCAACCGT ACATCGGCCT CCAGCTTCCG CGGCCCCGGA ATGACTACGG GGCTGGAGTG GCTGGCCCGC ATCCGCGAAG AAACGGGCCT GCCTGTCATT ACCGATATTC ATGAACCTGC TCAGGCCGCA CCTGTGGCAG CTGTGGCTGA CATTTTGCAA ATACCGGCAT TTCTGTGCAG GCAGACAGCC CTGCTGCAGG CGGCTGCCGC CACCGGCAGC GTGGTCAATG TAAAGAAAGG CCAGTTTGTG GCGCCTTGGG ATATGGGGCC AGTGGTGGAA AAACTGCATG CGGCAGGAAA CCGTCACGTG ATGCTTACCG AAAGAGGGGC AAGTTTCGGC TATAACAATC TTGTGGTCGA TTTCCGCTCT TTTTCCATCA TGCGCAGCCT GAATGTTCCT GTAATTTTCG ATGCCACCCA TTCCGTACAG CTTCCGGGCG GGCAGGGTTC CTGCTCCGGA GGGGACAGAA GGCATGTTCC TGCACTGGCC CGCGCAGCTG TGGCAGCAGG TGCAAACGGG GTTTTTCTGG AATGTCATCC CGACCCCGAC AAGGCGCTGT GCGACGGCCC CAACAGCTGG CCCGCGGGGC GCCTGAGCGA TCTTGTAGGA GATCTGAAGA GCATCTGGAG TATTGACTAT GCGTGTTAA
|
Protein sequence | MTFSTTELYK TLCDGPFIIA GPCVLESYEL ALETARIVRE AADRHAVTAI FKSSFDKANR TSASSFRGPG MTTGLEWLAR IREETGLPVI TDIHEPAQAA PVAAVADILQ IPAFLCRQTA LLQAAAATGS VVNVKKGQFV APWDMGPVVE KLHAAGNRHV MLTERGASFG YNNLVVDFRS FSIMRSLNVP VIFDATHSVQ LPGGQGSCSG GDRRHVPALA RAAVAAGANG VFLECHPDPD KALCDGPNSW PAGRLSDLVG DLKSIWSIDY AC
|
| |