| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1748 |
|---|
| Symbol | |
|---|
| ID | 3756748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1803994 |
|---|
| End bp | 1807197 |
|---|
| Gene Length | 3204 bp |
|---|
| Protein Length | 1067 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637782629 |
|---|
| Product | DEAD/DEAH box helicase-like |
|---|
| Protein accession | YP_388240 |
|---|
| Protein GI | 78356791 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAG ATAACAAGAA GCATGGAAAA GTTGGCGAAA CGCTCCTGCA AAGCATTGAT
AAGCAGTCAG AGCTGGCCGT CATTTCCAAT GCATTTTCAA TATTTGGTTT TGATGCCCTT
AAAAAAAGTA TCAGCAAGGT ATCCAAAGCC CGCCTTCTTC TCTCCTGCAA CAGGAAGGAC
GGCTCCTTGT CCCAGCTTTT AGCAGGTGAC GAATTCGAAA CTCGTTTCCG TAACCAGCTG
AACCAAAGCT ATATAGCTCG TGAGTGTGCT GAATGGATTA AGAAAAAAGC CCAAATCCGC
TTGGTAAAGA ATCCTGCGGC ACTTGGGCAG AACCTGTTTG TTGTGGATGG CAAGCCTTCC
CCGTTGGCAA TTCAGGGCAG CTCCGCTTTT ACGTGTGAAG GGCTAGGCTT TGCAGAGTCA
GACCGCCACC ACATGAATAT GTGCGTGTCC GATGCGCCCA ATGTCAGCCC ACTTTTGAGC
TGGTTTGAAA CGCTTTGGCG CGACACTGGC CTTACGGAAG ATGCAACAAG CACCATCGTG
AACGGCCTTG AAACGCTCCA CAAAGATAAC TCGCCAGAAT TTATATATTT CCTCACGCTC
TACAATATTT TCAATGACTT GCTGGATGAT ATTGACGAAG AAAACATCGT GAAAACAAAA
ACTGGATTCC ACGACACAAT CGTCTGGAAT AAGCTGTACA AGTTTCAGCG AGACGGTGTG
CTGGGAGCTA TTGATAAGCT TGAGAAGTAT AACGGCTGCA TCATAGCCGA TAGCGTCGGC
CTTGGTAAGA CGTTTGAAGC CCTTGCGGTG ATCAAATACT ACGAACTCCG TAATGACAGG
GTTCTTGTCC TTTGCCCCAA GAAGCTCCGT GATAACTGGA GCATTTACAC GATCAACGAC
AAACGCAATC TCTTGGCGAA AGACCGTTTC AATTACGATG TGCTCAACCA CACCGATTTA
ACTCGAAGGA CGGGCAAATC CGGCGAGATC AATCTTGAAA CGATCAACTG GGGCAATTAT
GACCTTGTTG TCATTGATGA ATCCCACAAC TTCAGGAACA ACACCAAGTC AGACAACGGC
CTGACCCGCT ACTCCCGCCT CATGACAGAC ATCATTCGCT CCGGTGTGAA GACCAAGGTG
CTGATGCTGT CAGCCACCCC AGTCAACAAT CGGATGAATG ACCTGAAGAA TCAGGTTGCG
TTCATCACGG AAGGTTTTGA TGCGGCCTTT GCTGATAACG GCATTACGAG CATTGAAGAT
ACGCTCCGTA AGGCTCAGAC CAAATTCAAC CAATGGCAAA AGCTGGCCGA GGAAGAGCGC
ACCGCCGAAA AGCTGCTTGA TAGCCTCAAC TTTGACTATT TCAAGCTTTT GGACATGCTG
ACCATTGCCC GTTCCCGCAA GCACATTGAA AAATATTATG ATGTTGCGGA AATCGGCGAA
TTCCCGGAGC GGTTAACCCC GATCAATATC AAAGCCGACA TAGACCTGAA CAACGAATTT
CCGGCACTGC GCGACATAAA CCGCACAATC AGACGGCTCA ATTTGAGCGC ATACTCGCCG
CTGAAGTACG TCCGCATGGA AAAGCGGAAT GAGTACGACC GCAAGTACGA TACCCTCATG
AAGGACGGTA AATCCGTTTT CAGGCAGGTT GACCGTGAAC AAAGCCTTGT TCATTTGATG
CGGGTGAACC TGCTCAAACG CATGGAAAGC TCCATCAATT CCTTTAGCCT CACGCTGGAA
AAGCTCCTCA GGGAGGTCAC GAACCTTCTT CAGAAGCTGG ACGACCACAA CGGCAGCGAG
ATTGAGGAGT TGAGCATTGA GGATATTGAA GTTGATTCTC CTGAATTTGA TGACTTCCTG
ATTGGCCGCA AGGTCAAGGT TCTTATTAAG GATTTGGACC AGATTCGCTG GAAGCAAGAC
CTTGAAGACG ACAAGGAAAA GCTTGAGCGG TTGCTCGCCG TTTCCCGTGC TGTAACGTCT
AATCGAGACG CCAAGCTGGA CAACCTGAAA AGCCAGATCA CGGCCAAATG TCAGGAGCCT
ATCAACGCCA GGAACAAGAA GGTCATCATA TTCACTGCAT TTGCTGACAC TGCTTCCTAC
CTGTTCGAAC ACATAGCTTC ATGGGCAAAG ACCAGCTTGG GGATTCATAC CGCCCTCATC
ACTGGCGGTG GAGCAAACAA GTCCACCTTG CAATCGGTTC GTTCTGATTT TGACGCCTTG
CTTGCAGCGT TTTCCCCTGT GTCAAAAGAA CGAAGCAAGA TTGATGATAC CGTAAGTGAT
GAAATTGACA TTCTCATAGC AACGGACTGC ATATCAGAAG GCCAGAACCT GCAAGACTGC
GACTTTCTTG TGAACTATGA CATTCACTGG AACCCGGTCC GCATCATCCA GCGATTTGGT
CGAATTGATC GCCTTGGCTC CAAGAACAAG CGCATCCAGC TTGTCAACTA CTGGCCCAAC
ATGGAGCTTG ATGAATACAT CAACCTTGAA GCGCGTGTAA GTGGCCGAAT GGTGTTGCTG
GACATATCCG CTACAGGCGA GGAAAACGTC ATCGAGCAGG ATAGCGCATC GCATATGAAC
GACTTGGAGT ACCGAAGGAA GCAGCTCCAG AAGCTGCAAG AAACAGTCGT TGATTTGGAA
GACCTGTCAA GCGGTGTGAC TATTACGGAC ATGACGCTCA ACGACTTCAA AATGGATTTG
TCCGCATATT TGAAAGACAA CGCCAGCCAG CTGGAAAGTG CTCCTCATGG CCTTTTTGCC
ATTTCAAGGC TGGAATCAGA CCTCGCTGCG GATGGTCTCG AACCCGGCGT TATTTTCTGC
CTGAAAAGCA AAAAGGACGA ACCAAGTGAC GATGGGTACG CCCTTGCGCC GTTTTATGTG
ACCTATGTGT CTGACGACGG TGACGTCACA TTGGGGTTCA CACAGGCCAA GAAGGTGCTC
GACATCCTCA AAAAGCAGGG CGTGACGCAC AAAAAGCCAG ACAGCGCGTT GCTCGAAGAT
TTCAACCGCC GAACGCAGTC TGGTAAGGAC ATGCGACATT ACTGCAATCT GCTTGAGAGC
GCAGTTACAA GCATCGTCGG TAAGGCAGAA GAAAAAGGCG TTGAAAGCTT GTTCAGCAGG
GGCGGAACGA ACTTCTCCAA ACAGAGCTTC AAAGGCATGG AAGACTTCGA AGTGGTCAGC
TACATGATCG TGGAGGCCAA ATGA
|
|---|
| Protein sequence | MFLDNKKHGK VGETLLQSID KQSELAVISN AFSIFGFDAL KKSISKVSKA RLLLSCNRKD
GSLSQLLAGD EFETRFRNQL NQSYIARECA EWIKKKAQIR LVKNPAALGQ NLFVVDGKPS
PLAIQGSSAF TCEGLGFAES DRHHMNMCVS DAPNVSPLLS WFETLWRDTG LTEDATSTIV
NGLETLHKDN SPEFIYFLTL YNIFNDLLDD IDEENIVKTK TGFHDTIVWN KLYKFQRDGV
LGAIDKLEKY NGCIIADSVG LGKTFEALAV IKYYELRNDR VLVLCPKKLR DNWSIYTIND
KRNLLAKDRF NYDVLNHTDL TRRTGKSGEI NLETINWGNY DLVVIDESHN FRNNTKSDNG
LTRYSRLMTD IIRSGVKTKV LMLSATPVNN RMNDLKNQVA FITEGFDAAF ADNGITSIED
TLRKAQTKFN QWQKLAEEER TAEKLLDSLN FDYFKLLDML TIARSRKHIE KYYDVAEIGE
FPERLTPINI KADIDLNNEF PALRDINRTI RRLNLSAYSP LKYVRMEKRN EYDRKYDTLM
KDGKSVFRQV DREQSLVHLM RVNLLKRMES SINSFSLTLE KLLREVTNLL QKLDDHNGSE
IEELSIEDIE VDSPEFDDFL IGRKVKVLIK DLDQIRWKQD LEDDKEKLER LLAVSRAVTS
NRDAKLDNLK SQITAKCQEP INARNKKVII FTAFADTASY LFEHIASWAK TSLGIHTALI
TGGGANKSTL QSVRSDFDAL LAAFSPVSKE RSKIDDTVSD EIDILIATDC ISEGQNLQDC
DFLVNYDIHW NPVRIIQRFG RIDRLGSKNK RIQLVNYWPN MELDEYINLE ARVSGRMVLL
DISATGEENV IEQDSASHMN DLEYRRKQLQ KLQETVVDLE DLSSGVTITD MTLNDFKMDL
SAYLKDNASQ LESAPHGLFA ISRLESDLAA DGLEPGVIFC LKSKKDEPSD DGYALAPFYV
TYVSDDGDVT LGFTQAKKVL DILKKQGVTH KKPDSALLED FNRRTQSGKD MRHYCNLLES
AVTSIVGKAE EKGVESLFSR GGTNFSKQSF KGMEDFEVVS YMIVEAK
|
|---|
| |