| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1731 |
|---|
| Symbol | |
|---|
| ID | 3756731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1789768 |
|---|
| End bp | 1790265 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637782612 |
|---|
| Product | phage-encoded protein-like |
|---|
| Protein accession | YP_388223 |
|---|
| Protein GI | 78356774 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3646] Uncharacterized phage-encoded protein |
|---|
| TIGRFAM ID | [TIGR02681] phage regulatory protein, rha family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA TCCGAAAACT GGTCGAAAAA GGAGTCAGCA ATTTTGCTGA GTCCTTCTAC
ATCAACGCTC AGAACAATTT GCTGCCGATA ATTTTATCGC CAGTGAATAC ACTGACGCTA
CAGGCCGCAT TGCTAAACCC GCTGACGTTG TGCGCGCCCT TGACGAGGAT GAAAACAGAC
GATCAGATTA CGTCGCATAA TATGCGCGGT AATCCCATGA CCACAAGCCT CAAGGTGGCT
GAGGTGTTCG GGAAGGAGCA CTACGATGTC ATTAAAGCAA TCGAAGCCCT TGATTGCTCG
AAGGAATTTA GAGACGGAAA TTTTACCGTC TCTTCCTATT CGGTTCCCAA CAACCGCCGT
CCCTACCCTA TGTACCTCAT GACCCGCGAC GGCTTCACCT TCCTCGCAAT GGGCTTCACC
ATTCCTGTCT TCCCGTTTCT CCTTCCCCTT AATCCTGCCA ATCCCGCTGA AGATTCGACG
CAGAAAGCCG CAAGTTAG
|
|---|
| Protein sequence | MRDIRKLVEK GVSNFAESFY INAQNNLLPI ILSPVNTLTL QAALLNPLTL CAPLTRMKTD
DQITSHNMRG NPMTTSLKVA EVFGKEHYDV IKAIEALDCS KEFRDGNFTV SSYSVPNNRR
PYPMYLMTRD GFTFLAMGFT IPVFPFLLPL NPANPAEDST QKAAS
|
|---|
| |