| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1725 |
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| Symbol | |
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| ID | 3756723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1782067 |
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| End bp | 1783824 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637782605 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_388217 |
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| Protein GI | 78356768 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00134138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACC AACCTGAACA GCAGCAGACG GCTATGATGA CATCTGAAAA TTCCACCGGC
TTCCCGTGGC TTACCCATTA CGACGAAGGG GTGCAGCCGA GCATTGAGTA TAAAAAACAC
GCTCTCTTCG CTTTTCTGGA TGAAGCAGCC GCGGAACACC CGCGCCGTAC GGCCATCATA
TTCCGCAATT ACAGGCTTAA CTACAGAAAA CTCAATGAGC TTGTGGAGAT TGTTGCCGCA
AATCTGCGCG CGCAAGGTCT GAGAGACGGA GACCGTGTTT CCATAATGCT GCCCAACCTG
CCTCAGACGG TTATTGCCTT CTGGGCTGTA CTCAAAGCAG GCGGCGTGGT GGTGATGACC
AATCCGTTGT ATATGGAAAA AGAACTGGTG CACCAGATAC ATGATTCCGG TGCCCGTTTC
ATGATCACAC TGGATCTGGT CTGGCCGAAA ATCAGTGAGC TTCGCGACAA ACTGGGCATT
GAGAAAATTT TTGTCACTAA AATTTCCGAA GCACTCCGCT TCCCGCTTAA TATTCTTTAC
GATTTCAAAT CACGTCGCGA GGGCACAGCA AAACAGGTTC CGTTTGACAA CGAAACCCTG
CTGCCGTGGA AAGTTCTTCT GAAAGGCAAA GAACGCTTCT GCACCCGGAT CGATGACCCT
GCCGAACGTC TGGCCCTTCT GCAATACACG GGCGGAACAA CCGGCATCGC CAAAGGGGTC
ATGCTCACAC ACCACAATAT CAGCGTCAAC GTGCAGCAGT GCTGTGCCAT GCTGCAGGAG
CTGGTACACC AGAAACATAC TTTCATGGGG CTGCTGCCGT ATTTTCATGT ATACGGGCTC
ACAACCTGCC TCATTTTTCC CACTTCTCTG GCGGCCACTA TCATTCCCTT CCCCCGATAT
GTCCCCAAAG ATGTTCTTGA TGGCATAGCC AAGCACAAAC CCACCATTTT TCCGGGTGCT
CCTTCTGTCT ACATTTCACT TATGCAGCAG AAAGATGTTG CAAAATATGA TCTGACCTCC
ATTGATTACT GCATTGCCGG TTCCGCTCCC ATGCCTGTGG AACAGATGAA GCGGTTCAAA
AAACTTACCG GTGCGGCCAT CATCGAAGGC TTCGGACTTA CAGAGGCATC GCCCATTACA
CATCTCAACC CCATACGCGG TCTCAATAAG CCGGGCTCCA TCGGCGTTCC TTTTCCGGAT
ACCGAAGCCC GCATTGTGGA TATGGAAGTC GGTTCAGTGC CGCTGCCCCC CGGTAAAATC
GGGGAGCTGA TCATCAAAGG ACCGCAGGTC ATGCAAGGCT ACTGGAACCG TCCGGACGAA
ACCGCAGGTA CGCTCCGCAA CGGCTGGCTG TACACCGGTG ACATTGCCAC CATGGACGAA
GACGGCTATT TCTTTATTGT AGACCGCAAA AAAGATATGT TTATTGTGGG AGGCTACAAT
GTTTATCCCA GAGAGATCGA CGAGGTGCTT TACGAGCATC CCAAGGTCAA GGAAGCCGTC
AGTGTGGGTG TGCCCCACGC CACCCGCGGT GAAATAATCA AAGCCTACGT GGTACCCAAG
TCAGGAGAAA CCCTGACAAA GAACGAAGTA ATAAGCCACT GCAGGGCTAA ACTGGCCAAC
TACAAAGTGC CGCGACAGGT CGAATTCAGA GAGGAATTGC CCAAGACGAT TGTGGGCAAG
GTGCTGCGCC GCGCTTTGCG CGCCGAGGAA GAAGAAAAGC TTCGGAAAAA GAAAAACACG
AAAAGTGATG ATCAATGA
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| Protein sequence | MPNQPEQQQT AMMTSENSTG FPWLTHYDEG VQPSIEYKKH ALFAFLDEAA AEHPRRTAII
FRNYRLNYRK LNELVEIVAA NLRAQGLRDG DRVSIMLPNL PQTVIAFWAV LKAGGVVVMT
NPLYMEKELV HQIHDSGARF MITLDLVWPK ISELRDKLGI EKIFVTKISE ALRFPLNILY
DFKSRREGTA KQVPFDNETL LPWKVLLKGK ERFCTRIDDP AERLALLQYT GGTTGIAKGV
MLTHHNISVN VQQCCAMLQE LVHQKHTFMG LLPYFHVYGL TTCLIFPTSL AATIIPFPRY
VPKDVLDGIA KHKPTIFPGA PSVYISLMQQ KDVAKYDLTS IDYCIAGSAP MPVEQMKRFK
KLTGAAIIEG FGLTEASPIT HLNPIRGLNK PGSIGVPFPD TEARIVDMEV GSVPLPPGKI
GELIIKGPQV MQGYWNRPDE TAGTLRNGWL YTGDIATMDE DGYFFIVDRK KDMFIVGGYN
VYPREIDEVL YEHPKVKEAV SVGVPHATRG EIIKAYVVPK SGETLTKNEV ISHCRAKLAN
YKVPRQVEFR EELPKTIVGK VLRRALRAEE EEKLRKKKNT KSDDQ
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