Gene Dde_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1717 
Symbol 
ID3756715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1775895 
End bp1776650 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content53% 
IMG OID637782597 
Productchemotaxis protein PomA 
Protein accessionYP_388209 
Protein GI78356760 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.690132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAG GAACAATTAT CGGCATTGTC GGTGCTATCG GGCTCATCAT CGGTGCCATC 
GTGATGGGCA GCGGCCTCGG CGGATTTATA GACATACCTT CGGTTGCCGT TGTTGTGGGC
GGAACTATCG CCGTTGCATT CGTCATGTTC CCTATCAAAA CGGTGCTCAG TTCCATCAAA
GTGGCCATGA AGTGCTTTTT TGCCAAGGCG CCTGATCCTG TCGAATCCAT TCAGCAGATC
ATCAGTCTGG CCGAAAAAGC CCGCAAAGAA AGTCTGGTCG CTCTGGAAAA AGTTTCTGTG
GACGATCCGT ATCTTAAACG CGGCGTACAA CTGGTGGCCG ACGGAACGGA AGAATCGCTG
GTCAGGTCTG TCATGGAGAT AGACATCAGC ATTATGAAAC AGCGTCACAG ACGCGGGCAG
GAAGTATTTA AAGGGCTCGG AACCTACGCA CCGGCCTTCG GCATGATAGG TACGCTTGTC
GGACTGGTAC AGATGCTGCA AAACCTCAGC GACCCCGCAT CCATCGGCCC TGCCATGGCC
GTTGCTCTGC TGACTACGTT TTACGGTGCG GTACTGGCCA ACGTGTTTTT TTTACCCATG
GCCAAACGTC TTGAAGAACG CTCCAATGAA GAAGCACATA ATATGGAGCT GACCATGGAA
GGCGTGCTTT CCATACTGAA CGGCGATCAC CCGAGCATTG TGCGGGAAAA GCTGGAATCA
TTCCTTCCCC CGAGCCAGCG CTCGGCCAAG AAGTAG
 
Protein sequence
MDIGTIIGIV GAIGLIIGAI VMGSGLGGFI DIPSVAVVVG GTIAVAFVMF PIKTVLSSIK 
VAMKCFFAKA PDPVESIQQI ISLAEKARKE SLVALEKVSV DDPYLKRGVQ LVADGTEESL
VRSVMEIDIS IMKQRHRRGQ EVFKGLGTYA PAFGMIGTLV GLVQMLQNLS DPASIGPAMA
VALLTTFYGA VLANVFFLPM AKRLEERSNE EAHNMELTME GVLSILNGDH PSIVREKLES
FLPPSQRSAK K