Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1717 |
Symbol | |
ID | 3756715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1775895 |
End bp | 1776650 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637782597 |
Product | chemotaxis protein PomA |
Protein accession | YP_388209 |
Protein GI | 78356760 |
COG category | [N] Cell motility |
COG ID | [COG1291] Flagellar motor component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.690132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAG GAACAATTAT CGGCATTGTC GGTGCTATCG GGCTCATCAT CGGTGCCATC GTGATGGGCA GCGGCCTCGG CGGATTTATA GACATACCTT CGGTTGCCGT TGTTGTGGGC GGAACTATCG CCGTTGCATT CGTCATGTTC CCTATCAAAA CGGTGCTCAG TTCCATCAAA GTGGCCATGA AGTGCTTTTT TGCCAAGGCG CCTGATCCTG TCGAATCCAT TCAGCAGATC ATCAGTCTGG CCGAAAAAGC CCGCAAAGAA AGTCTGGTCG CTCTGGAAAA AGTTTCTGTG GACGATCCGT ATCTTAAACG CGGCGTACAA CTGGTGGCCG ACGGAACGGA AGAATCGCTG GTCAGGTCTG TCATGGAGAT AGACATCAGC ATTATGAAAC AGCGTCACAG ACGCGGGCAG GAAGTATTTA AAGGGCTCGG AACCTACGCA CCGGCCTTCG GCATGATAGG TACGCTTGTC GGACTGGTAC AGATGCTGCA AAACCTCAGC GACCCCGCAT CCATCGGCCC TGCCATGGCC GTTGCTCTGC TGACTACGTT TTACGGTGCG GTACTGGCCA ACGTGTTTTT TTTACCCATG GCCAAACGTC TTGAAGAACG CTCCAATGAA GAAGCACATA ATATGGAGCT GACCATGGAA GGCGTGCTTT CCATACTGAA CGGCGATCAC CCGAGCATTG TGCGGGAAAA GCTGGAATCA TTCCTTCCCC CGAGCCAGCG CTCGGCCAAG AAGTAG
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Protein sequence | MDIGTIIGIV GAIGLIIGAI VMGSGLGGFI DIPSVAVVVG GTIAVAFVMF PIKTVLSSIK VAMKCFFAKA PDPVESIQQI ISLAEKARKE SLVALEKVSV DDPYLKRGVQ LVADGTEESL VRSVMEIDIS IMKQRHRRGQ EVFKGLGTYA PAFGMIGTLV GLVQMLQNLS DPASIGPAMA VALLTTFYGA VLANVFFLPM AKRLEERSNE EAHNMELTME GVLSILNGDH PSIVREKLES FLPPSQRSAK K
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