Gene Dde_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1716 
Symbol 
ID3756714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1775127 
End bp1775888 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID637782596 
Productchemotaxis protein PomB 
Protein accessionYP_388208 
Protein GI78356759 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.81071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAG AAGATAAAAA AGCTCCACCG CCACCGAAGC GGCAGGACGA TACCCCCTGT 
GAAGAGGGGC TGCCGCCGTG GATGGCCACC TTTGCCGACA TGATGTCGCT GCTGCTCTGT
TTTTTTGTGC TCCTTTTGTC GTTCGCTCAG CAGGATGCAA ATAAATTCAA AACACTTATG
GGTTCGATAA AAGAAGCTTT CGGGGTACAG ATAAAGCGTA AGGAAGCCAG TTTTGCGGCA
TTCTCACCTT CCGAGTTCGA ACGCAAGGAC GTGGAGCTGG ACAAAGAGAA CAAAGAGCTG
CTGGGGATGG TTCTGGAAGT AAAAAACTTT GTCATTCAGG ATCCCGAGCT TAAAAAGACC
GCAAAGATAA CCACTGAAGA CGCCGGCGTT GTCATCAGAA TACCCTCTTA CGCGTTATTT
GCTCCCGGAT CGGCAAAGCC GCTGCCCGAT GCCGCGTCAA AAACCGCCAC AGTTGTCAGA
ATACTGCGTG AACGCAATCT GGACCTTGTT GTCCGTTGTC ACACAAGCGA TGAAAAAGCA
GAGGAAGAAT CGCTGTATCC CAGCAACTGG GAGCTGTCTT CAGCGCGGGC GGCCGCCGTA
CTGCGTCTGC TGATAAAAGA GGGAGACATA CCCCCGTCGC GTATGAAAGC CGTGGGGTAT
GCCGATTCAC AACCTCTTTT GCCCAACAAC ACCGACGAAA ACAGAGCCAT CAACAGCCGG
ATGGAGTTTT ACTTTCACGC TCCGAGCGTG AAAAGCTGGT AG
 
Protein sequence
MAAEDKKAPP PPKRQDDTPC EEGLPPWMAT FADMMSLLLC FFVLLLSFAQ QDANKFKTLM 
GSIKEAFGVQ IKRKEASFAA FSPSEFERKD VELDKENKEL LGMVLEVKNF VIQDPELKKT
AKITTEDAGV VIRIPSYALF APGSAKPLPD AASKTATVVR ILRERNLDLV VRCHTSDEKA
EEESLYPSNW ELSSARAAAV LRLLIKEGDI PPSRMKAVGY ADSQPLLPNN TDENRAINSR
MEFYFHAPSV KSW