Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1716 |
Symbol | |
ID | 3756714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1775127 |
End bp | 1775888 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637782596 |
Product | chemotaxis protein PomB |
Protein accession | YP_388208 |
Protein GI | 78356759 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.81071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCAG AAGATAAAAA AGCTCCACCG CCACCGAAGC GGCAGGACGA TACCCCCTGT GAAGAGGGGC TGCCGCCGTG GATGGCCACC TTTGCCGACA TGATGTCGCT GCTGCTCTGT TTTTTTGTGC TCCTTTTGTC GTTCGCTCAG CAGGATGCAA ATAAATTCAA AACACTTATG GGTTCGATAA AAGAAGCTTT CGGGGTACAG ATAAAGCGTA AGGAAGCCAG TTTTGCGGCA TTCTCACCTT CCGAGTTCGA ACGCAAGGAC GTGGAGCTGG ACAAAGAGAA CAAAGAGCTG CTGGGGATGG TTCTGGAAGT AAAAAACTTT GTCATTCAGG ATCCCGAGCT TAAAAAGACC GCAAAGATAA CCACTGAAGA CGCCGGCGTT GTCATCAGAA TACCCTCTTA CGCGTTATTT GCTCCCGGAT CGGCAAAGCC GCTGCCCGAT GCCGCGTCAA AAACCGCCAC AGTTGTCAGA ATACTGCGTG AACGCAATCT GGACCTTGTT GTCCGTTGTC ACACAAGCGA TGAAAAAGCA GAGGAAGAAT CGCTGTATCC CAGCAACTGG GAGCTGTCTT CAGCGCGGGC GGCCGCCGTA CTGCGTCTGC TGATAAAAGA GGGAGACATA CCCCCGTCGC GTATGAAAGC CGTGGGGTAT GCCGATTCAC AACCTCTTTT GCCCAACAAC ACCGACGAAA ACAGAGCCAT CAACAGCCGG ATGGAGTTTT ACTTTCACGC TCCGAGCGTG AAAAGCTGGT AG
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Protein sequence | MAAEDKKAPP PPKRQDDTPC EEGLPPWMAT FADMMSLLLC FFVLLLSFAQ QDANKFKTLM GSIKEAFGVQ IKRKEASFAA FSPSEFERKD VELDKENKEL LGMVLEVKNF VIQDPELKKT AKITTEDAGV VIRIPSYALF APGSAKPLPD AASKTATVVR ILRERNLDLV VRCHTSDEKA EEESLYPSNW ELSSARAAAV LRLLIKEGDI PPSRMKAVGY ADSQPLLPNN TDENRAINSR MEFYFHAPSV KSW
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