| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1711 |
|---|
| Symbol | |
|---|
| ID | 3756709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1767578 |
|---|
| End bp | 1769161 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637782591 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_388203 |
|---|
| Protein GI | 78356754 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.185044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCC TTGGCAACAA CATTGCCAAC GTGAATACCG TGGGCTTCAA AGGCGCCAGA
ATGGACTTTG AGGACTTCAT CAGTCAGGAC GTCAATACCG CATCGGGCAC GCGTCAGGTG
GGCCGCGGGG TAGGCATAGG CACCATTTAC GGCGACTTCA GTCAGGGTTC GTTTGAAACC
ACCACGGAAG CGACTGACCT TGCCATAGGC GGACGCGGCT TCTTTGCCGT ATCGCCCAAA
GGTGAAGAGA CCGCATACTA CACCCGCGCC GGCAACTTCC GCTTCGACAA GGAAGGATAT
CTGGTAGATC CCCACGGCTA TGTGCTGCAG GGCTGGCAGA TTGAAACTCC CAGACCTTCT
CTGGCCACCA GCACAGCTGG CAGTGTCAGC TCGACATCCA AAATCAAGGG CGCCGGTGTC
CCCAAAGATA TCCAGCTGCC CGGTTTCACC GCGGAACCCA AGCACACATC CAATGTGACC
ATCATCAGTA ACCTTGATGA TGCCTCCGGC GGTGACAACA GCACCAACGC GGCCAACCCC
ATGTTTGCCC TTTTCAACAG CTGGGACGGC ACTGCCGAGC CTCCGCTCAG TGAAAACAGC
TTTGCCTATC AGACCACCAT CAAGGTGTAC GATGAAGGCG GCACCGCCCA CAACCTGACC
ATCTACTACG ATCAGGTGGC AAGTGACACC ATTTCCGGTG AAGGCAGCGG CCAGAAGCAC
TGGGAATATA TCGTCACCAT GGATCCCGCA GATGAACAGC GCAGCATCAA CGGTATCGAT
TTCAAGGGAA CCCCCGCAGC AGGCATGCTT ATGGCCGGCA CCCTGACGTT TGACAGCTCA
GGCCAGCTTA TCGACCAGAG CGCCTTTACG CCGGGCAGCA GCGCCACAGG TTCGATGAAA
GATCTGAGCA ACTGGAACCC CACCACGTTC TCTACCAACG GCTACCCCAT GTTTGTGGCC
AACTTTTCCG GCATTTCCAA TGCAAGCTAT GTCACCCCGA ACCCTGATCC GGCCGCGCAG
CCGTATATCA TGGAACTGAA TCTGGGGCTT AAAAACTCCG ACCCGTCCAC ATGGGCCAGT
GCCGGGGTGT CCAACGCTTC GCTTGTGGGT ACCAACGTCG CCAACCTGCC GTCGCTGGGC
AACCAGGCAG AACGTCAGTC GTCTGCAACC ACCAGTTTTT CGGGCTCTTC GTCGACCCCG
ACACGCTATC AGGACGGGTA TACCTTCGGC TTTCTGCAGA ATGTCACCGT CACACGCGAC
GGCATTCTTC AGGGACGCTA TTCAAACGGT GCAGTTCTCG ATCTCTACCA GATCACGCTC
TACGACTTCC AGAGCAAGGA CAACCTCCGG CGTGAGGGCG GCAACCTGTT CAGCGAAAGC
AATGCATCGG GACTGGCGGC CCCCGGCCCT GCCAATGCCA ACGGCTACGG CACGGTCAAC
TCCAACTCGC TTGAGCAGTC CAACGTTGAC CTTGCCAAGG AGTTCGTGAA CATGATTACC
ACGCAGCGTG GCTTCCAGTC CAACAGCAAG GTGATCACCA CAACAGACAC CATGCTCGAA
GTTGTTATTC AGATGAAGCG TTAG
|
|---|
| Protein sequence | MNVLGNNIAN VNTVGFKGAR MDFEDFISQD VNTASGTRQV GRGVGIGTIY GDFSQGSFET
TTEATDLAIG GRGFFAVSPK GEETAYYTRA GNFRFDKEGY LVDPHGYVLQ GWQIETPRPS
LATSTAGSVS STSKIKGAGV PKDIQLPGFT AEPKHTSNVT IISNLDDASG GDNSTNAANP
MFALFNSWDG TAEPPLSENS FAYQTTIKVY DEGGTAHNLT IYYDQVASDT ISGEGSGQKH
WEYIVTMDPA DEQRSINGID FKGTPAAGML MAGTLTFDSS GQLIDQSAFT PGSSATGSMK
DLSNWNPTTF STNGYPMFVA NFSGISNASY VTPNPDPAAQ PYIMELNLGL KNSDPSTWAS
AGVSNASLVG TNVANLPSLG NQAERQSSAT TSFSGSSSTP TRYQDGYTFG FLQNVTVTRD
GILQGRYSNG AVLDLYQITL YDFQSKDNLR REGGNLFSES NASGLAAPGP ANANGYGTVN
SNSLEQSNVD LAKEFVNMIT TQRGFQSNSK VITTTDTMLE VVIQMKR
|
|---|
| |