| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1699 |
|---|
| Symbol | |
|---|
| ID | 3756697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1753926 |
|---|
| End bp | 1756544 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637782579 |
|---|
| Product | M16 family peptidase |
|---|
| Protein accession | YP_388191 |
|---|
| Protein GI | 78356742 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AGCGAATTCT AGCCTTTTTT ATCGGAGCAG CCTTAATGTT TTTTTCTTTT
CAAGCCGCTC ATGCCGCCAG TGTAACCAGA CTGGCCAACG GTCTGACTGT ACTGATTCAG
CAGGATGACC GTTTTCCGCT TGCCTCGCTC AGGCTGTATG TCCATGCGGG TTCAGCCTAT
GAAACACCGC AGCAGGCAGG CATAAGCCAC CTGCTTGAGC ACATGGTGTT CAAAGGGACG
GAAAAACGCC CCGAAGGCGG GGTTGCCGGA GCCATCGAGC AGATAGGCGG CAACATCAAT
GCCGCAACAA GCTTTGACTA TACGGTATAT CTTACAGATG TACCCTCCGA ACACTGGCGT
CTGGGCATGG ACGTACTCAA GGATATGACT TTCGGTGCAA AAATCAGCCC TGAAGCGCTG
GCTCCGGAAA AAGAGGTTGT TCTTGCCGAA CTGGAACGCG GAGAAGACAC CCCCGGCAGT
CTTCTCTTCA AACGTCTGAC GGCAAAAGTG CTGGCCCGGA CCCCGTATGA ACGCCCCATC
ATCGGGTACC GCGAAACAGT GAGCGCGATA ACCAGCAAAG ACATTCACGA CTATATCGAC
CGCCTGTACC AGCCGCAGTC CATGCTGCTG GTGGTATGCG GAGCCGTGAA CGAACAGGAG
GTGCTGGCAG AAGCTGAAAA GCTTTTCGGA AATCTTGCAA ACACCCGGAC TTGCGTGCCC
CCGCAGCCGG TCACACCACC CGTTTCGCCC GCCGCCCCCG CACTGACTGC GGAGCCGGGC
AAGTGGAACA AGGTCTACGC GGGATTCGCC CTGCCTATTC CCAACTTTCA TGATGCCCGG
ATACCTGCCG TCGAAGTACT TGCCCAGATG CTGGGCGGAG ATAAAACCTC TCTGCTTTAC
AGAGAGTTCA AGTACGACAA GCAGCTTGTG GACGATATCT CAGTCTCTGC CTATTCCTTT
GAGCGCACAG GACTTCTGCT GATTACGGCC ATACTTGATC CGCAGAAAAC AGAGAAATTC
ACCCGCGAGC TTTCGGCGGC ACTGGCGCGG CTGAGTGCGG ACAGTTTCAC AGACAACGCT
CTGGCGCGGG CAAAGCTCAA TCTGGAAGAC GAACTGTTCC GGTCCAAGGA AACGCTGTCC
GGTCTGGCTT CCAAGCTGGG ACATTTTTAT TTTTTTGAAA ACGGCGAACA AAGTGAACTG
AACTATCTGC AAAGCCTCCG TCAGGTGGAA AAAACATCAG TTCAGGACAT TCTGGACACT
TTTTTCACTC CCGAAAGGCT GAACGGAGTG CTGCTTACTC CGCAGAATGC CGGACTGAAC
AGCGATGACC TGACAGAGCT GTTCCGCGAC GGCTGGCCCG CAAAGGGCAG CGGGCATGCC
GCCCCCGCGG AAAAAGGTGA CAACGGGCAG CAGCAGGAAG TGATTGAACT GGGCGACGGG
CGCACTGTGG TGCTCATTCC CGACGAGACA CTTCCTTATA CGGCGGTCGA TCTGGTGTTC
CGCGGCGGTG ATGCCCTGCT GGATGAAGAC AGGCAGGGTC TTGCAGCCCT TGCAGCCAGA
GTGCTGACCA AAGGCACCCA GCAGATGGAC AATGCCGCTC TGGAGGCTTT CAAGGCAGAC
AGAGCAGCCA GTCTGGCCGC TTCTGCAGGC AGATCGTCTT TCACCATCAG CGCGCGCTAC
CCGGAAAGAT TCAGTGCCGA CATCACCGGT CTGTTCCGCA ACGTTGTCAC CGCTCCGGCA
CTGGCTGCAG AAGAAACCGC GCGTGAAAAA GACAACCAGA TTGCATCCAT AAAGGCCCGT
GAAGATCAGC CGCTCGGGCT TGCGTTCCGC AGATTGTTTC CGTTTCTTTT CCACAACAGT
GCTTACGGAT ACCTGCATCT GGGTGAAGAG CAGCGTCTTG CCGCCTACAC CGCGGAAGAT
GTGGCCGGAT TCTGGAAAGT GCAGCGGACA CAACCATGGG TGCTTGCGGT ATGCGGACAG
TTCGACCGCG AAGAGATTCT CGGGCTGGCA CGCAGCCTGC CCGCCCCCTC CGGGCCTGTC
GCCGTGCCTG CGGTGCCGCT GTGGTCTGCT GAAACACAGC TGGATATCTC GCTGGAGGAC
AGAAATCAGG CGCATATGCT GATGATATTC AAAACCGTAC CCATAACGCA TGAAGACACC
CCGGCGCTGG AGCTGCTGCA GACAGTTCTT GCCGGACAAT CCGGCCTGCT TTTTACAGAT
CTGCGCGACA AACAGGGGCT TGGCTACACT GTGACGGCGT TCCCGTGGCA GTCGGAACAT
GCCGGTCTGC TGGCTTTTTA TATTGGCACC GACCCTGAAA AACTTGCACA GGCCGACGCC
GGTTTTAAAA AAGTAATCCG CGATCTGCAG GAGGCCCCCC TGCCTGAAGA AGCCATCCGC
CGCGGTAAAA ACATGCTGCG GGGCGACTAC TACCGGGGCA GGCAGAGTCT TGGCAGCCGC
AGCAACGAAG CCGCCCGCCT TGCCGGCTCG GGGCTGCCTC TTGATTTTGA AAAAGGACTT
ATCGAAAAAG CGGAAAAAGT GGATGCCACC GCCCTGCAGG AGGTGGCCCG CAGATATCTC
ATTCCGCAGG ATGCGTATAT CATCAGGGTA CTGCCCTGA
|
|---|
| Protein sequence | MKKQRILAFF IGAALMFFSF QAAHAASVTR LANGLTVLIQ QDDRFPLASL RLYVHAGSAY
ETPQQAGISH LLEHMVFKGT EKRPEGGVAG AIEQIGGNIN AATSFDYTVY LTDVPSEHWR
LGMDVLKDMT FGAKISPEAL APEKEVVLAE LERGEDTPGS LLFKRLTAKV LARTPYERPI
IGYRETVSAI TSKDIHDYID RLYQPQSMLL VVCGAVNEQE VLAEAEKLFG NLANTRTCVP
PQPVTPPVSP AAPALTAEPG KWNKVYAGFA LPIPNFHDAR IPAVEVLAQM LGGDKTSLLY
REFKYDKQLV DDISVSAYSF ERTGLLLITA ILDPQKTEKF TRELSAALAR LSADSFTDNA
LARAKLNLED ELFRSKETLS GLASKLGHFY FFENGEQSEL NYLQSLRQVE KTSVQDILDT
FFTPERLNGV LLTPQNAGLN SDDLTELFRD GWPAKGSGHA APAEKGDNGQ QQEVIELGDG
RTVVLIPDET LPYTAVDLVF RGGDALLDED RQGLAALAAR VLTKGTQQMD NAALEAFKAD
RAASLAASAG RSSFTISARY PERFSADITG LFRNVVTAPA LAAEETAREK DNQIASIKAR
EDQPLGLAFR RLFPFLFHNS AYGYLHLGEE QRLAAYTAED VAGFWKVQRT QPWVLAVCGQ
FDREEILGLA RSLPAPSGPV AVPAVPLWSA ETQLDISLED RNQAHMLMIF KTVPITHEDT
PALELLQTVL AGQSGLLFTD LRDKQGLGYT VTAFPWQSEH AGLLAFYIGT DPEKLAQADA
GFKKVIRDLQ EAPLPEEAIR RGKNMLRGDY YRGRQSLGSR SNEAARLAGS GLPLDFEKGL
IEKAEKVDAT ALQEVARRYL IPQDAYIIRV LP
|
|---|
| |