| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1684 |
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| Symbol | |
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| ID | 3756682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1736281 |
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| End bp | 1738026 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637782564 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_388176 |
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| Protein GI | 78356727 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0799101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTAG CTGATTATAA ACGTGAACGA AGCACGCTCA TCATCGCTGT TCTTACTTTG
GTAACGGTGG GACTGAGTCT TATTGTTTCC ACCGGGCAGG TGCTTTCGCA GCAGGAAGAG
GCAGGAACCC AGCACCTCAT TCTTGCCTCG CGCTCTGTGC TTCAGGCTGT GGACAGTTCG
TTACGGCGCA ATATGACGAC CGATGCGCAG GGCGGGGCGA CATTCGGCGC AGGAGCAGCA
GAATTTTTCC GTGAACTGGA ACAGAGCGGA GAAGTGCTGT TTGTCGGGCT TATCGACAAG
CACGGCGGGC GCGTGCTCAC ATCGCGCAGC AGCGGAGAGT CCGGAACCAT CCTTTTTCCT
CCTGATGCGT TGCGCACTCT GGCACAGACC GGCGAGTGGC ATGGCAGAGT CGGCTTCGGG
CTGGCCAGCG CTTATGTATA CGGCAAAAGG ATTATTCCCG GTAACACCGG CAGCATGAGT
ATTGCGCGGG CGGAAACCGG CGAGCCTCTA CCCGCGTTTC TCGTGGTGGG GCTGGATATG
GCCAAGCATC AGGCCATCTA CCGGAAATTC CGGCAGAATG CTCTTTTTCA GGCTGCCTAT
ATTCTGGGAG CCGCTGTACT GATATGGGCT TTGGCCATGG GGCTTATCAA ACGCAGAGAA
ATGGCAGGCA AAGCACGTCA GCTTGAGCGT TTTCAGGTAA AGCTGCTGGA TAATCTGCCC
GACGGGCTTG TCACCATTGG TGAAAACGGC ACCATTCTGG CGGCTAATCC GGCGGCAAAC
GGCATATTGC AGGCGCGCGG AGAGGGACTG GCAGGCAAAC TGCTGGATGA TCTGCCCGAC
GATATTCTGC GCTGCCTTGC GGCTCCGGAA ACGGAAACGG CAGGGTGGCG TCAGGACAGT
GTCCGCGGAG CGCATCTTGA AATTCTGAGT GTACGGATGC CCGGCAGCAG CGAAACAGAC
GATGCTTCGC GCCTTGTGAT TATCCGTGAC AGAACCCAGA TACGTACATT GGAAAAAAGC
CTGAGCGATG CTGAAAAACT GGCTGCAGTG GGAACGCTGG CTGCCGGTGT GGCACATGAA
ATACGCAACC CGCTGAGCGC GCTGCGCGGG TTTGCCCAGT ATTTTGCCAA AAAATTCAAG
GACAGACATC CGGAAGAAGT TTACGCGCAG ACCATGGTGC GCGAGGCTGA CCGCCTGAAC
AGGGTCATCA CCGATCTTCT GTATCTTGCG CGTCCGCGGC GCGTTACCCC GCGGCTTGTC
CGGCTGCGTG CACTTGTTTC CGAGGTGGAA GATCTGGTCC GCTTTGATCT GGACGAACGC
AAGGTCAATA TGGTTGTCAG TCTGGGGCCT GAAGAGGTCT GGGCAGATGA GGATACCCTG
AAGCAGGCGG TACTCAATCT GGTACTGAAC AGCCTGGACG CGCTGAAGGA AACTGACGGT
GGTGCCCGAC AGGTGGATGT GGCATCGGGG CTGGCAAAAG ACGGTGTCTG GCTTTTTGTG
CGCGACACGG CCAACGGAAT GACTAAAGAA CAGGCCGAAC AGGCGTTTGA GCCTTTTTAC
ACCACCAAGA AAAAAGGAAC AGGGCTCGGG CTTGCCCTTG TGCACAAGAC CATGCGCGAC
CATGGCGGCA AGGCGATAAT CGATACTGCT CCGGGTCACG GAACCACTGT GGGGTTGTTT
TTTCCCGACC ATGACGATGA CGTTGCTGAC GATACCAATG AAGCTGACGC TGAGAGGGAT
TCATGA
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| Protein sequence | MEVADYKRER STLIIAVLTL VTVGLSLIVS TGQVLSQQEE AGTQHLILAS RSVLQAVDSS
LRRNMTTDAQ GGATFGAGAA EFFRELEQSG EVLFVGLIDK HGGRVLTSRS SGESGTILFP
PDALRTLAQT GEWHGRVGFG LASAYVYGKR IIPGNTGSMS IARAETGEPL PAFLVVGLDM
AKHQAIYRKF RQNALFQAAY ILGAAVLIWA LAMGLIKRRE MAGKARQLER FQVKLLDNLP
DGLVTIGENG TILAANPAAN GILQARGEGL AGKLLDDLPD DILRCLAAPE TETAGWRQDS
VRGAHLEILS VRMPGSSETD DASRLVIIRD RTQIRTLEKS LSDAEKLAAV GTLAAGVAHE
IRNPLSALRG FAQYFAKKFK DRHPEEVYAQ TMVREADRLN RVITDLLYLA RPRRVTPRLV
RLRALVSEVE DLVRFDLDER KVNMVVSLGP EEVWADEDTL KQAVLNLVLN SLDALKETDG
GARQVDVASG LAKDGVWLFV RDTANGMTKE QAEQAFEPFY TTKKKGTGLG LALVHKTMRD
HGGKAIIDTA PGHGTTVGLF FPDHDDDVAD DTNEADAERD S
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