| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1676 |
|---|
| Symbol | |
|---|
| ID | 3756674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1727022 |
|---|
| End bp | 1728302 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637782556 |
|---|
| Product | Elongator protein 3/MiaB/NifB |
|---|
| Protein accession | YP_388168 |
|---|
| Protein GI | 78356719 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.560297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAT CACGCATACA GCCCAGACTC CTTGTCGCCG ACAAGGATGG AAATATATAC
GATCACCCTG ACCTGCTCAT GGTATGCCGC AGAGGGCACG AGTTTGCCCA GCCGCGCCCC
GACGAGCTTA TGCCGCTGCC GGAAGAAAGC GACCTGTTTC TGCTGCCCGG CCGTCAGGCA
GTGGGCCTTT CTGAAGAAAC AGGTGAAATT GAAGCACTGG AAGAGCTGGC TGTGGCGGCC
TTTGCCGCGC CAGCCCACAC CCTGACCGCA CATGCGGCCT ATATCTCCTC GCCAGACGCC
CCTACACTGC CGCTGTTTGC CTACGGCGCA GTAGGATACG CCAACGGCAG GTTCTACATC
TGTGCCAAAA GAGTGGATCA GGACGAGAGA CAGGTTTTCA GCAGTATTTC AAAAAAACGC
ATCAAGCAGA ACGCGCATGC GCTTATGAAA GCCTATCCTG AAAACAGACT TATGCAGCAC
CTGATGAGTA ACTGCGCGCT GACATACTGC TGCCCGGCAG CGCGTAACCT TGCTCTGGGC
AGGTACGAGG CTCCCCTGCC CACATCGCGC AGCTGCAATG CCCGCTGTGT CGGATGTATT
TCCCAGCAGG AAGACGGCTC CAGAATCTGC AGCACCCCGC AGAACAGGCT CAGCTTTACC
CCCACGCCGG AAGAAATTGC AGAAGTGATG CTGCACCATG GCAAAGCTGA AACCGAAAAA
CCCGTATTTT CATTCGGGCA GGGCTGCGAA GGCGAACCAC TCACCGAGGC GAACATCATC
GCTCAGGCCG TACACCTTTT CCGCAGCAAG GGCGGAACCG GCACCGTGAA CGTTAACACC
AACGCCTCTC TGCCGCAGGC TGTCATCAAA CTTGCCGAAG CCGGCATCAG CTCCATACGG
GTCAGTCTGA ACAGCGCCAG AGAAGAAGTA TACAACCGCT ATTACCGCCC CCGCGGGTAC
ACCTTTGCCG ATGTGCGCAG TTCCATTGCC GAAGCGCATA AACGGGGAGT CTTTGTTTCG
CTGAACCTGC TCTACTTCCC CGGAATTTCC GATTGCGAGC TTGAGCTGCA GGCTCTGGAC
GAACTGATCG GCACGGAAAA GGTTGACTTC GTGCAACTGC GCAACCTGAA TATTGATCCC
GAAATGTATC TTGAGCTACT AGACGGCATT GAGTTCGGCC CCAGCGCGGG GTTCATCAAC
TTCCGGCGCA GGCTGCGCAA ATCCAATCCG TGGCTCCAGT TCGGCTACTT CAACCCCTAT
CTGCCACAAA ATCCGGCTTA G
|
|---|
| Protein sequence | MASSRIQPRL LVADKDGNIY DHPDLLMVCR RGHEFAQPRP DELMPLPEES DLFLLPGRQA
VGLSEETGEI EALEELAVAA FAAPAHTLTA HAAYISSPDA PTLPLFAYGA VGYANGRFYI
CAKRVDQDER QVFSSISKKR IKQNAHALMK AYPENRLMQH LMSNCALTYC CPAARNLALG
RYEAPLPTSR SCNARCVGCI SQQEDGSRIC STPQNRLSFT PTPEEIAEVM LHHGKAETEK
PVFSFGQGCE GEPLTEANII AQAVHLFRSK GGTGTVNVNT NASLPQAVIK LAEAGISSIR
VSLNSAREEV YNRYYRPRGY TFADVRSSIA EAHKRGVFVS LNLLYFPGIS DCELELQALD
ELIGTEKVDF VQLRNLNIDP EMYLELLDGI EFGPSAGFIN FRRRLRKSNP WLQFGYFNPY
LPQNPA
|
|---|
| |