Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1635 |
Symbol | |
ID | 3756632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1686704 |
End bp | 1688434 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637782514 |
Product | Fis family transcriptional regulator |
Protein accession | YP_388127 |
Protein GI | 78356678 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.980236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGTCGGT TTCATCCGGC ACGGCTGTGT GCGACTATGT TTTTTGCGGT GACTTGCCGT GAACAGCACA ATGTGTTTGA CCTGAACCAT GCTGGTAGTC GACCTAGGTC TCAGCGCCGT GGCCGGACGC CGCAATCAGC ACTTATTATG AACCAGATCA ATACCCAAGA TTCCAGATTA CAGCCATATC TAGGCACGCT GCAGCGCATT GTTTCCGACA TGGGCCCGCA GCGTCCGTTT CAGTCTTCGC TGAAGTCATT ACTGCGCACG CTGGCTGAAA ATCACCATTT CAAACGCCCC CACCTTGTTA TATTCGATCC CGAAACACAA ACGCTCAAGC TTAGCCTGAC GCATGATCCT ACCAAAGCGC AGGATGTGGA ATATTCGCCG GGAGTGGGGG TGACCGGACA GGTTTTCAGT TCCGGACAGC CTGTTATCGT GCCGAGGATG AAAGATCATC CTTCGTTTCT CAATAAAGCG TTCGGCCGTT CGGAAGAAGA GCTGGCAACT CTGGGCTTTA TATGCGTGCC TGTGCTCGGA CCGGGCGAAG AAGCCTCTCC CCGGGAGGTT ATCGGCACAC TGAGCGTGGA CACGCCCATA ACTGACCTGC CCTCTCTGGA AGGACAGTGC CGTTTTCTGC AGGTTGTTGC CGGTATGATA GCCAACCAGG CTGCCTACCT GCAGGAAGAA ATGGCCCGTC AGAAGCATAT GATGACGCAG GGCCTCATAG GCGGTGACGT TGCCGAAAAC ACGGTGCAGG CCGCTAATAT TGTGGCTGCG TCCAAGTCCA TGCGCCTTGT GCTCAATCAG GTGGCTCAGG TTGGTCCCAG CAGGGCGACG GCTTTGCTGC GGGGCGAATC GGGCACCGGC AAAGAGCTTC TTGCAGAGGC CATACATCAG GCCAGCCCCC GGCGTGATAT GCCGCTTATC AAGCTTAACT GCGCGGCTTT ACCATCCGAT CTGGTGGAAA GCGAGCTGTT CGGCTATCAG AAGGGCGCGT TTACAGGTGC TGTCCAGAAT AAAAAAGGCC TTTTTGAGCT TGCACACAAG GGGACGCTGT TTCTTGATGA AATAGGTGAA TTGAGTGCCT CGGCTCAGGC TAAAGTGCTG CGTGCCATTC AGGAACAGGA AATTCAGCGG CTCGGCAGTG AACAGACCAT TTCCGTTGAT GTCCGCCTGA TCTGCGCCAC ACACCAGCAT CTGGAAGAGC TTGTGGAGAG CGGCAGTTTC CGTGAGGATC TTTATTACCG GATCAATGTG TTTCCGGTGT TCATTCCTCC GCTGCGCGAA CGCCGCGAAG ATATTCTTCC CGTTGCTGAG CATTTTCTTA AAGAATACGC AGAGGAATAT CAGAAAAGCA TCAAGCGTAT TTCCACCCCT GCCATCGACC TGCTTACACA GTATCACTGG CCCGGTAACA TCCGCGAACT GAAAAACTGC ATAGAGCGTG CAGTGCTGGT GTGTGATGAA CAGGTTATCC GTACGTATCA CATGCCCCCT TCGCTGCAGA CAGCAGAAAG CACAGCAACA GATTCCAGTC TGTCGTTCTG CGAGGCGGTG GCCAAGTTTG AGCAGGAACT ACTGGTTGAC GCGCTGAAAA AAGCCCGTGG CAATATGTTG CAGGCTGCCC GCGATTTGCG CGTAAGCTAC CGTATTGTTA ACTATAAAGT TAAGAAGTAC GGTATCGATG CCAAAAAGTT CGCTGTCAGT AAAGGACGCA TGGGCAGATA G
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Protein sequence | MCRFHPARLC ATMFFAVTCR EQHNVFDLNH AGSRPRSQRR GRTPQSALIM NQINTQDSRL QPYLGTLQRI VSDMGPQRPF QSSLKSLLRT LAENHHFKRP HLVIFDPETQ TLKLSLTHDP TKAQDVEYSP GVGVTGQVFS SGQPVIVPRM KDHPSFLNKA FGRSEEELAT LGFICVPVLG PGEEASPREV IGTLSVDTPI TDLPSLEGQC RFLQVVAGMI ANQAAYLQEE MARQKHMMTQ GLIGGDVAEN TVQAANIVAA SKSMRLVLNQ VAQVGPSRAT ALLRGESGTG KELLAEAIHQ ASPRRDMPLI KLNCAALPSD LVESELFGYQ KGAFTGAVQN KKGLFELAHK GTLFLDEIGE LSASAQAKVL RAIQEQEIQR LGSEQTISVD VRLICATHQH LEELVESGSF REDLYYRINV FPVFIPPLRE RREDILPVAE HFLKEYAEEY QKSIKRISTP AIDLLTQYHW PGNIRELKNC IERAVLVCDE QVIRTYHMPP SLQTAESTAT DSSLSFCEAV AKFEQELLVD ALKKARGNML QAARDLRVSY RIVNYKVKKY GIDAKKFAVS KGRMGR
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