Gene Dde_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1630 
Symbol 
ID3756627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1681096 
End bp1681935 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID637782509 
ProductTPR repeat-containing protein 
Protein accessionYP_388122 
Protein GI78356673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.374072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATGC TTCGTAAAAC ATCTCCCAGA ACCGTACGCC AAAATCTTGC GCGCGCCAAG 
TCCGCCATAC GGCGGGACAA TATTTTCAAA GCAATAGAAT GTACACTGGC CGCACTGCGC 
GCCTATGTAC CGGGCGAACT GCTTGCCACT GCCCGCTTTG AAACCGAAGT CCTGCTGGAA 
GAGGTTATAA CAGACCTCAA CCGTTCTTCA GGCATCACCG GTTTTTTCCG CCACCAAAAG 
ATAGAAACCT CCGTTCCCAT ACGGTATGCC CGCGGCAGAG AAGATGAGCT GGTGGACAGG 
CTGGAAACTA TCCTCCACGG ACTTATACGT CTGCAAGAAG AAACCCTGAG GCTGGAAAAA 
GAAGAAGAGC AGGCCAGAAA GCTGCAGCTG CTGGAAAACG GCCGTGCCTG TCTTGATAAA 
GGCCAGCTGC CCAGAGGAAA AAGCTACCTG CGCAGAATTG TTGACGAGTG GGGCCATGAA 
GAAGGCATAA TGTCGTCCAT CGGTCTGATC ATGCTTGAAT ACGGGCTATA TTTCGAGGCC 
GCCGATGTTC TGAGCCATGC CATACGGCGC TTTCCCGCAG ACAGCAAAGC ATGGGCCGGG 
GCCATTCAGG CATACAAGAC TCTCAAAGAG TATGAAAAAG CGGAGTCGCT GTACCTGAAG 
GGTATGAAAC AGTTCGGCAG GCACCCAGTC ACTCTGCTGA ATCTGGCAAA GCTGTACATG 
GACTGGCGCA AGACAGATCT GGCCTATGAT TATGCACGGC TCGCTCTGGA ACGCGACCCG 
CAACTTGCTG AAGCCTCCGA CATTGTCCGG CAGGCAGAAA AAAAACTCTT TTCGCGCTAA
 
Protein sequence
MVMLRKTSPR TVRQNLARAK SAIRRDNIFK AIECTLAALR AYVPGELLAT ARFETEVLLE 
EVITDLNRSS GITGFFRHQK IETSVPIRYA RGREDELVDR LETILHGLIR LQEETLRLEK 
EEEQARKLQL LENGRACLDK GQLPRGKSYL RRIVDEWGHE EGIMSSIGLI MLEYGLYFEA 
ADVLSHAIRR FPADSKAWAG AIQAYKTLKE YEKAESLYLK GMKQFGRHPV TLLNLAKLYM 
DWRKTDLAYD YARLALERDP QLAEASDIVR QAEKKLFSR