| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1629 |
|---|
| Symbol | |
|---|
| ID | 3756626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1680074 |
|---|
| End bp | 1681099 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637782508 |
|---|
| Product | heptosyltransferase family protein |
|---|
| Protein accession | YP_388121 |
|---|
| Protein GI | 78356672 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC CTCAGAAATG GCTGGTTGTA AGGCTCAGCG CTCTTGGTGA CGTTGTGCTT
ACCACCGGCG TGCTCGACTA CCTGTCCCGG CACCGCGGGT GGCGGTTCCA CGTTCTGACG
CGCAGGGCCT GGGCACCTGT ATTTGACGGG CTGCCCGCCG TAGAAGGGGT TGCCCCTCTG
GATGACGCGG ATTTGCACAT GCCGCGCATG GCCGGGGTAC TGCGACGCCT TGCGCGACAG
TATGAAGGCT GGGGGCTGCT TGACCTGCAC GGCACTTTGC GGTCGCGGCT GCTTGGTTCC
CTGTGGCGGG GACCTGTGCG CAGGTATCCT AAAATGGCGG TCTGCCGCCG GCTTTTTCTG
GCCAGCGGCG GGCGTTTATG CGCTGCAGCA CTGGAGCAGT TCAATGTTCC GCAGCGGTAT
GCTCTGGCAG TGGAAAAAAA GGCGCCGCCC AGAAATGCGC TGCTGCCCGT CATCAGGCTT
GATGAGGCCG AAACTGCAGC TGCCGGCGGC CTGCTGCCGT CTGCACCTGA CAGGCCTTTG
GTGGCGCTGC ACCCGTACTC AACCCATTCG CACAAGGCAT GGCTGGACGA CAACTGGCGC
GAGCTGGCGG TGGGACTGGT GCATAGCGGA CTGCGCTGTG TGGTTGTGGG GGTGGGGCAG
TCGCCTTTTG CAGGTATGCA GCTTCCGGAG GCATACTTTG CCGACTGTAC GGGGCGTACG
TCCCTGCGGC AGAGCTGTGC GCTGCTGGCC GCTGCCGATG TGCTGGTAAC GGGTGATTCC
GGCCCCATGC ATATGGCCTG CGGAACAGGC ACTCCTGTGG TGGCTCTGTT CGGGCCCACA
CACCGTGCAT GGGGGTTTTA TCCCGAGGGT CCCCGTGATG TGGTGCTTGA AGCCGATATG
GCGTGCAGGC CCTGTTCGCT GCACGGCAGC AAACCCTGTG CCCATGGTCA GCGCTGCATG
CAGAGCATCA GTGTTGACGA TGTGAGGCAG GGGATACGGC AGGTGCTGAA CAGTGCAGCG
CTTTAG
|
|---|
| Protein sequence | MNEPQKWLVV RLSALGDVVL TTGVLDYLSR HRGWRFHVLT RRAWAPVFDG LPAVEGVAPL
DDADLHMPRM AGVLRRLARQ YEGWGLLDLH GTLRSRLLGS LWRGPVRRYP KMAVCRRLFL
ASGGRLCAAA LEQFNVPQRY ALAVEKKAPP RNALLPVIRL DEAETAAAGG LLPSAPDRPL
VALHPYSTHS HKAWLDDNWR ELAVGLVHSG LRCVVVGVGQ SPFAGMQLPE AYFADCTGRT
SLRQSCALLA AADVLVTGDS GPMHMACGTG TPVVALFGPT HRAWGFYPEG PRDVVLEADM
ACRPCSLHGS KPCAHGQRCM QSISVDDVRQ GIRQVLNSAA L
|
|---|
| |