| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1628 |
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| Symbol | |
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| ID | 3756625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1677566 |
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| End bp | 1679866 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782507 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_388120 |
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| Protein GI | 78356671 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGGC AAGAAACGCT GCCGCTCTTA ACAACCGGCC GGGCTGACGG GGACACAGCT
CCCGACTCGG CTGTCCGGCC TCTGCTGAAG GGCGGAGTCC CGCTGCATAT CATCCTGCTC
ATACTGCCCG AACACAGCCT CATGGGTAAA CTGTACGGTC AGGAGATGGC GGACAACATC
ATCACCATGG CCGCAACCGC CATGCACAAA GCCCCTGCTC TGAAGGGCGC AAAACCTGTC
CTGTTTTCTC CGTCAGCGGG CGAACTATGC GCCGCATTTC CCGCTGAAAA CGCACAGCGC
GGCAATCTTG CCGACACGGC GTACACCATC CGACTTATGG TCCAGAACAG CATCGAGCCC
GAGGCTGTCC GCTGGACAGG CAGAAGCATA CAGATAAACG CAGGATGCGC AGTCTGTCAG
CCGGCGGCAG ACAGCGTCCG GCAGGCCCGC GGATTCATGA GTGCCCTGGC CGAAGCGCGG
CAGCTGGCGC AACAGGGTAT GAACGCCGGT CAGTTGCATA TGGCAGGCGA ATTGCGCAGC
ATACTTGCCC GCAAATCACT GCGGACGCTT TATCAACCCA TCATCAACCT GAGCACAGGC
GAAACAGCCG CATGGGAGGC TCTTACCCGG GGGCCGGAGG GCACCGTTTT CGAGTCTCCT
CTCATTCTGT TCGACATGGC CGAAGAACTG GGACAGCTTT TCGCCATTGA GCGCCTGTGC
CGCGAAAGCG CTGTACGCGG CGCAGGCACG CTGGGACCGG AACAACTGCT GTTCCTCAAC
GTGCATCCCC GCACGCTTAC AGACCCGGCT TTTTCCACTG GCAATACCCG TAAAATGCTG
GAAGCTGCGG GGCTGAGCCC GCAAAACGTG GTTCTGGAAA TAACGGAGCG CCACAGCATC
AGAAACTTCA CCCTGTTTTA CAAGACACTG GCCCACTATA GGGGCCAAGG CTATAAAATA
GCCATTGACG ATGCGGGAAC AGGGTATTCC GGACTTTCTT CCATTGCCGA AATAACACCC
GATTTCATCA AGGTGGACAT GTCGCTGATA CGGGGCATCA ACAGAGACCC TGTCCGGCGG
GCTCTGATGG AGACCATGAT TTCGCTGGCA GATAAAATAG GCTCGCGGGT TATTGCCGAA
GGCATTGAAA CCCGCGAGGA AGCCATGACT CTGGCGGAAA CAGGTGCGCA TTTCGGACAG
GGGTTTTATT TCGGCAGACC GTGCGCCAGC CGCAGGACAA TCACAATCAG CCCTGAAAAG
CTGCGTATAC AGCCTTTCAG CACGGTATTG CACCCTGTGG GCTGCTCTGT ACCCACCGGC
AGTCTTGCTC TGCCGGTCAC CAGCGTAACG GGCAACACCA GAGTAAGTAC CGTACGCGAG
CTTTTTGAAC AGCACCATCC GATGACCAGC ATAGCCGTGG TCGATGACGG GCGGCCGGTG
GGGCTTGTCA TGGACTATCA TCTGAACCGT CAGTTGTCGG CACAGTATGG TGTGGCCCTG
TATTTCAAGC GGCCCGTGTC GTCGGTTATG GACCATACCC CGCTTGTGGT TGATGAAAAC
GAGCCGGTGG AATGCACAGC CCAGAGAGCC ATGGCGCGGG GAAAGCTGCA GGCGTACGAT
GATGTTCTTG TCACCCGCGC AGGCAGACTC ACCGGAGCTG TATCAGTGCA GAGCCTGCTC
AACACGCTGG CAAAAGTGCA GGTGGAACTG GCAAAAGGGT CAAACCCGCT CTCCGGTCTG
CCCGGCAATG TGGCACTGGA AAGAGAAATG GAGCGTCGGC TGCATTCCGG TCAGCGCTTT
GCGCTTATCT ATGCCGATCT GGACAACTTC AAAAGCTACA ATGACAGCTA CGGATTTAAA
AACGGCGACA GGGTCATTCT GCTGCTGGCG CGTCTGCTTT CATGGGCTGT AAGGCGGCAC
GGCACAGACA GCGATTTTAC CGCGCATATC GGCGGCGACG ACTTTGTGTG CGCCGTGCAT
GCAGACAGGG CGGAAAGAAT ATGTCAGGCA GTGGTACGCT GCTTCAAACG TCTGGTGCGC
TCGTGCTACT GCGAAAAAGA TCTGGCAAAA GGCTGGATAC GCGCACGGGG CCGTGACGGG
GTGGAAAGAC AGTACAGCCT TGTTTCTGTA TCGCTGGCAG TCATTGAATG TCACGGCAGC
GTCTCGCTGC AGGAAATCGG AGAACGTGCG GCGCAGATAA AACACTTTGC CAAAACGCTG
GAGGGCAATG TCTATGTGAC CGACCGGCGG GCGCCGCTGG GCAGCGGCAA GGCAACGGCA
TGCACCTGCC AACCGGCATA G
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| Protein sequence | MARQETLPLL TTGRADGDTA PDSAVRPLLK GGVPLHIILL ILPEHSLMGK LYGQEMADNI
ITMAATAMHK APALKGAKPV LFSPSAGELC AAFPAENAQR GNLADTAYTI RLMVQNSIEP
EAVRWTGRSI QINAGCAVCQ PAADSVRQAR GFMSALAEAR QLAQQGMNAG QLHMAGELRS
ILARKSLRTL YQPIINLSTG ETAAWEALTR GPEGTVFESP LILFDMAEEL GQLFAIERLC
RESAVRGAGT LGPEQLLFLN VHPRTLTDPA FSTGNTRKML EAAGLSPQNV VLEITERHSI
RNFTLFYKTL AHYRGQGYKI AIDDAGTGYS GLSSIAEITP DFIKVDMSLI RGINRDPVRR
ALMETMISLA DKIGSRVIAE GIETREEAMT LAETGAHFGQ GFYFGRPCAS RRTITISPEK
LRIQPFSTVL HPVGCSVPTG SLALPVTSVT GNTRVSTVRE LFEQHHPMTS IAVVDDGRPV
GLVMDYHLNR QLSAQYGVAL YFKRPVSSVM DHTPLVVDEN EPVECTAQRA MARGKLQAYD
DVLVTRAGRL TGAVSVQSLL NTLAKVQVEL AKGSNPLSGL PGNVALEREM ERRLHSGQRF
ALIYADLDNF KSYNDSYGFK NGDRVILLLA RLLSWAVRRH GTDSDFTAHI GGDDFVCAVH
ADRAERICQA VVRCFKRLVR SCYCEKDLAK GWIRARGRDG VERQYSLVSV SLAVIECHGS
VSLQEIGERA AQIKHFAKTL EGNVYVTDRR APLGSGKATA CTCQPA
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