| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1622 |
|---|
| Symbol | |
|---|
| ID | 3756619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1671375 |
|---|
| End bp | 1672487 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637782501 |
|---|
| Product | iron transport periplasmic binding protein |
|---|
| Protein accession | YP_388114 |
|---|
| Protein GI | 78356665 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000308392 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGA TTTCGGTTGT CACGGCCCTG TTGGTGGTTC TGTTCGGTTT TTCAGGTGCC
CGGGCTGCGC TGTCCCTGCC GGCTGTGCAC GATGCTGCAG GAAAGGCTCT TGCCGTACCG
GTTCCCGTGC AGCGGGTTAT CTGTTCGGGC TCGGGTTGTC TGCGCTTGCT GACATACCTT
CAGGCTCAGC ATATGGCCGT GGCGGTGGAC GATATCGAAG TCCGCAGAGA CCGTTTTGAC
GCCCGGCCAT ACGCTCTTGC CAACCCTTCA TTTAAAAATC TTCCCGTATT CGGGCAGTTC
CGCGGATACG ACAACCCGGA ACGCATTCTT ATGCTTGCGC CTCAGCCGCA GGTTGTTTTT
AAAACCTACA CAAGCTCCAT GGGGTACGAT CCCCTTGAGC TGCAGCAAAA AACCGGCATT
CCCGTGGTGG TGCTCAATTA TGGCGATCTT GGAGCCGGAC GCCAGCATCT GTATGACAGC
CTGCGCATGA TGGGGCATGT GGTGGGCAAG ACCGGCCGTG CCGAAGAAGT AATCACTTTT
TTTGAAAACG CCATTGCCGA TCTGCAACGG CGGACCGCCG GCATTGCGGA AAATATGCGG
CCGTCTGTTT TTGTGGGGGG GATAGCTTTC AAGGGGCCGC ACGGGTTTCA GTCCACCGAG
CCTGCTTACC CGCCTTTCAG TTTTGTAAAT GCACGCAACC TTGCCGGGCA GGATGCCGTG
GGCAGCAGGC TGCAGCATTC TGACGTTGCC CGTGAAAAAA TTGTCCAATG GAATCCCGAC
TACCTCTTTG TCGATCTGTC TACTCTCCGG CTGGCGGACA AAGCCAACGG TATAGAAGAG
CTTCGTTCCG ACCCTGCATA TGCGACGCTG AGTGCGGTGC GGCAGGGGCG TGTGTTCGGC
CTGCTGCCGT ACAACTGGTA CACGCAGAAT TACGGTTCCA TACTTGCCAA TGCCTACTAT
ATCGGCTCCG TGCTGTATCC CGAACGTTTT GCCGACGTGG ATCCCGCAGC AAAAGCTGAT
GAGATTTATA CGTTTCTTGT GGGTAGTCCC GTTTTTGACC AGTTGAACAG ATCCTTTGAT
GGGCTTGCAT ACAGAGCGGT TCCGGTGAAC TGA
|
|---|
| Protein sequence | MRMISVVTAL LVVLFGFSGA RAALSLPAVH DAAGKALAVP VPVQRVICSG SGCLRLLTYL
QAQHMAVAVD DIEVRRDRFD ARPYALANPS FKNLPVFGQF RGYDNPERIL MLAPQPQVVF
KTYTSSMGYD PLELQQKTGI PVVVLNYGDL GAGRQHLYDS LRMMGHVVGK TGRAEEVITF
FENAIADLQR RTAGIAENMR PSVFVGGIAF KGPHGFQSTE PAYPPFSFVN ARNLAGQDAV
GSRLQHSDVA REKIVQWNPD YLFVDLSTLR LADKANGIEE LRSDPAYATL SAVRQGRVFG
LLPYNWYTQN YGSILANAYY IGSVLYPERF ADVDPAAKAD EIYTFLVGSP VFDQLNRSFD
GLAYRAVPVN
|
|---|
| |